Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10895g00001 ATGGCTACCATCATTTTAAGGTCAAATGAAGTGCTTCATGCCTTGCTCTTGTTCTGTCTCTTCCTGATGCTGCACAACTGTCGTGCCTATGAATTCATTGTCGGAGGCCAAAAGGGTTGGAGTGTGCCAAGTGATCCCAATTCTAACCCTTATAGTCAATGGGCACAAAAGAGCAGATTTCAAATAGGAGACTCCTTAGTGTTCAATTACCCTTCTGGCAAAGACTCAGTGATTCAAGTAAGCAGCAAAGACTATGAGAGTTGCAACACTGATGCATACGCTGAAAAATTCTCAGACGGCCACACAGTCATCAAGCTCAGCCAATCAGGGCCTCACTACTTCATCAGTGGAAACAAAAACAACTGTCTCAAAAATGAGAAACTGGTGGTGATTGTGTTGGCCGACAGGAACAACAAAAACACATACACCAACCAAACAAGTCCTTCACCTTCTCCTTCTCAGTTTACAACACAATCAGTAGCTCCATCCCCAGCACCTTCTCAGCAACAGGTTCCATCTCCGGTGGCAGCACCTCCTCAGCAAGAGGCTGCTTCTCCACCATCTCCACCCTCTAACCAAACACCAGCTCCAGCTCCTGTTTCTGATCAGCCTTCTCCTCCTTCTCCTCCTCACAATGATGCTTCCTCAATCCTGGTCAGTTTTGCTGTTTCTGTTGGAGCATTATTCATGGCCTCGGTTCTGTTTTTTTCTTTGTAA 717 0.4589 MATIILRSNEVLHALLLFCLFLMLHNCRAYEFIVGGQKGWSVPSDPNSNPYSQWAQKSRFQIGDSLVFNYPSGKDSVIQVSSKDYESCNTDAYAEKFSDGHTVIKLSQSGPHYFISGNKNNCLKNEKLVVIVLADRNNKNTYTNQTSPSPSPSQFTTQSVAPSPAPSQQQVPSPVAAPPQQEAASPPSPPSNQTPAPAPVSDQPSPPSPPHNDASSILVSFAVSVGALFMASVLFFSL 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10895g00001 238 CDD OsENODL1_like 30 133 IPR041846 -
Vium10895g00001 238 MobiDBLite consensus disorder prediction 167 211 - -
Vium10895g00001 238 MobiDBLite consensus disorder prediction 140 213 - -
Vium10895g00001 238 MobiDBLite consensus disorder prediction 140 166 - -
Vium10895g00001 238 Pfam Plastocyanin-like domain 40 124 IPR003245 GO:0009055
Vium10895g00001 238 Gene3D - 30 146 IPR008972 -
Vium10895g00001 238 FunFam Early nodulin-like protein 9 30 144 - -
Vium10895g00001 238 PANTHER BLUE COPPER PROTEIN 30 163 IPR039391 GO:0009055
Vium10895g00001 238 SUPERFAMILY Cupredoxins 29 133 IPR008972 -
Vium10895g00001 238 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10895g00001 Vium-Chr10895 2180 3816 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10895g00001 11 168 Phytocyanin Superfamily AT3G20570 50.296 4.61e-51 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium10895g00001 - - gmx:100788637 287.345