Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10817g00002 ATGGCACTACAACTCCCATCACTGCCTTCTACCGCTCCCGCTTTTCTCGCAGCCTTTCTTGTTCTCCTCCTCTTCCTCCGCCGTCTCCGCCGCCGCCGATACAACCTGCCCCCGGGCCCAAAGCCCTGGCCCGTAATAGGCAATCTCAACCTAATCGGTTCCCTCCCCCACCGGTCGATCCACGAGCTCAGTCAAAAATACGGGCCCATCCTGCACGTCTGGTTCGGGTCAAATCCGGTGGTGGTAGGCTCCTCTGTGGAAATGGCAAAGGCCATTCTGAAAACTCACGACGCCACCCTCGCCGGCAGGCCCAAATTCTCTGCCGGCAAATACACAACCTACAACTACTCCGACATAACTTGGTCCCAATACGGCCCGTACTGGCGCCAGGCTCGTAGAATGTGCTTGATGGAATTGTTCAGTGCAAAACGCCTGGAAGAATACGAATACATTAGAAAAGAAGAGCTGCGTGGTCTGATCAACCATCTCTTCAATTCCGCTAACAAAACGGTTTTAATAAAAGACCACCTTTCCAGTTTGAGTCTGAACGTCATAAGTCGCATGGTGTTGGGGAAGAAGTACCTGGAAGAGTCCGAAAACGCCATCGTTTCGCCCGAGGAGTTTAAAAAGATGCTTGACGAGCTGTTTTTGCTTAATGGGGTGTTGAACATTGGAGACTTTATTCCTTGGATTAACTTCCTTGACCTGCAGGGTTACATAAAGAGGATGAAGACTCTCAGCAAGAAGTTCGACAGGTTCATGGAACACGTCTTGGACGAACATATCGAGAGGAAGAAAGGTGTTAAGGATTATGTCGCAAAGGACATGGTCGATCTTCTTCTGCAACTTGCAGAAGATCCCACTCTTGAGGTGAAGCTTGAGAGGCATGGCGTCAAGGCTTTTACTCAGGACCTAATAGCTGGTGGGACTGAGAGTTCTGCTGTAACAGTGGAATGGGCAATCTCAGAGCTACTGAGAAGACCAGAGATTTTCAAGAAGGCAACAGAGGAGCTAGACAGGGTAATAGGAAGAGAAAGATGGGTTGAAGAGAAGGACATTGTGAATTTACCTTATGTTAATGCCATTTCAAAAGAAGTGATGAGGTTGCACCCTGTGGCACCAATGTTGGTGCCAAGAATGGCCAGAGAGGATTGCCATGTTGGAGGGTATGACATCCCTAAAGGGACTCAAGTGCTTGTGAATGTATGGACTATTGGAAGAGATCCTGCAATTTGGGACAACCCAAATGAATTCCAACCAGAGAGGTTTCTGTCTAAGGACATTGATGTGAAAGGTCATGACTATGAGTTGCTGCCATTTGGTGCTGGCAGAAGGATGTGTCCAGGGTACCCTCTTGGCCTTAAGGTCATTCAATCAAGTTTGGCCAACCTCTTGCACGGATTCAACTGGAGACTGCCTCAGAATGTGAAGAAAGAGGATTTGAACATGGATGAGATTTTTGGGTTGTCTACACCTAAGAAAATTCCTCTGGAAACACTTCTTGAACCTAGACTTCCACACCATCTTTATTCTCTCTGA 1539 0.4802 MALQLPSLPSTAPAFLAAFLVLLLFLRRLRRRRYNLPPGPKPWPVIGNLNLIGSLPHRSIHELSQKYGPILHVWFGSNPVVVGSSVEMAKAILKTHDATLAGRPKFSAGKYTTYNYSDITWSQYGPYWRQARRMCLMELFSAKRLEEYEYIRKEELRGLINHLFNSANKTVLIKDHLSSLSLNVISRMVLGKKYLEESENAIVSPEEFKKMLDELFLLNGVLNIGDFIPWINFLDLQGYIKRMKTLSKKFDRFMEHVLDEHIERKKGVKDYVAKDMVDLLLQLAEDPTLEVKLERHGVKAFTQDLIAGGTESSAVTVEWAISELLRRPEIFKKATEELDRVIGRERWVEEKDIVNLPYVNAISKEVMRLHPVAPMLVPRMAREDCHVGGYDIPKGTQVLVNVWTIGRDPAIWDNPNEFQPERFLSKDIDVKGHDYELLPFGAGRRMCPGYPLGLKVIQSSLANLLHGFNWRLPQNVKKEDLNMDEIFGLSTPKKIPLETLLEPRLPHHLYSL 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10817g00002 512 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10817g00002 512 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10817g00002 512 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10817g00002 512 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10817g00002 512 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10817g00002 512 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10817g00002 512 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10817g00002 512 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10817g00002 512 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10817g00002 512 Gene3D Cytochrome P450 26 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10817g00002 512 SUPERFAMILY Cytochrome P450 37 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10817g00002 512 CDD CYP71_clan 68 497 - -
Vium10817g00002 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Vium10817g00002 512 FunFam Cytochrome P450 84A1 28 505 - -
Vium10817g00002 512 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10817g00002 512 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10817g00002 512 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10817g00002 512 Pfam Cytochrome P450 37 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10817g00002 512 PANTHER CYTOCHROME P450 98A9 17 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10817g00002 Vium-Chr10817 35395 38027 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10817g00002 12 512 Cytochrome P450 AT5G07990 42.330 9.03e-143 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium10817g00002 K20623 - gmx:100790480 932.169