Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10767g00001 ATGGACTCACAACAGCTTTTCAGTTTTGGTGTTGCAAGTGCAGGATTACCTTACGTGCCATCTTTTCCCACTGTTCCATCCCTACCCAACAGGCTGCTTGGATCCTTGAAATATGACATTGGCAACTCACCTAATTCACCATTTTCCACTTATTTTGATTCTGACACCCTTTCTGCATTGAGTGACGGCCAAGAGCAATACAGCCCCGGAGAAATCCTCTCGGGTGTCAGCTCCTCTTGTAACTCTTCACTGGAAACCAACCAATATATGTATAAATCAATCTCTTCTGTAGACTTCATAGACAATTTCCCACTATATTCTGCTTGGAACTCTCTTCCACAGAATGTGAATAGTAATCAGAAAATCCAACACGCTTTGCTAGAGCTAGAAACTGCTCTGATGGCCCCCGATGATGATCAAGTTACCACTCCAAATACATTGGCCGGGAGCAGCAGACCAATGGCATCTGGCCACAGATACAAGCCCTGGAGGCATGAGAACGATGGATCACAATATGCTCAGCCATCATATGTTCCCAGCAGTAGGCTATCAAGTGAAGTTGTGCATGTAGAGAAACGCCAAAAGTTGACGGAGGAACCATCACTACAAGCTTTCCCACCAAACGATCTGAAGCAACTGCTGATTGCATGTGCCAAAGCCCTTCATGAAAACAACATCAAAGATTTTGATCAATTGGTAGGAAAGGCTAGAGATGCTGTGTCGATCAACGGGGAGCCAATCCAGCGGCTTGGCGCTTACATGGTAGAAGGGCTTGTTGCAAGGAAGGAAGCATCAGGAAAGAGCATCTATCATGCCCTTAGGTGCAGAGAGCCTGAAGGTGAAGAATTACTCTCTTACATGCAACTGCTGTTTGAGATTTGCCCCTACTTAAAATTTGGTTACATGGCTGCCAATGGAGCCATTGCGGAAGCCTGCAGAAACGAGGATCGCATACACATCATAGACTTCCAAATTGCTCAAGGATCTCAGTGGATGACACTTCTTCAAGCCCTTGCAGCAAGACCTGGTGGTGCTCCACATGTTCGGATAACGGGGATTGATGATCCTGTTTCTAGATATGCACGTGGCGGCGACGGATTAGATATTGTTGGTAAAAGGTTGGGCTTGATGTCTGAGAAATTTGGCATCCCAGTTGAGTTTCATGGAGTGCCTGTTTTTAGTGAAGAAGTGACAAGGGAAATGCTAGATATCAGGCCTGGAGAGGCCTTGGCAGTGAACTTCCCCTTGCAGCTCCATCACACAGCTGATGAGAGTGTTCATGTGAGTAACCCAAGGGATGGACTATTGAGGTTGGTGAAGTCACTTTCTCCCAAGGTGACCACACTGGTGGAGCAGGAATCAAACACCAACACAACCCCTTTCTTCAACAGGTTTATCGAAACCTTGGATTACTACTTGGCAATCTTCGAGTCTATTGATGCCAGCCTACTCCCAAGAGAAAGCAAGGAGCGGATCAATGTGGAGCAACATTGTCTGGCCAGGGATATAGTGAATATTATTGCTTGTGAAGGCAAGGAAAGGGTTGAGAGACATGAACTATTGGGGAAGTGGAAATCCAGGTTAACAATGGCTGGATTCACTCAGTCTCCTTTGAGCTCTTATGTGAATTCTGTCATAGGAATCCTTCTCAAGTGCTATTCAGAACATTATACTCTGTTGGAGAAGGATGGAGCCATGTTGTTGGGGTGGAAGGATAGAAATTTGATATCAGCTTCTGCCTGGCATTGCTGA 1752 0.4583 MDSQQLFSFGVASAGLPYVPSFPTVPSLPNRLLGSLKYDIGNSPNSPFSTYFDSDTLSALSDGQEQYSPGEILSGVSSSCNSSLETNQYMYKSISSVDFIDNFPLYSAWNSLPQNVNSNQKIQHALLELETALMAPDDDQVTTPNTLAGSSRPMASGHRYKPWRHENDGSQYAQPSYVPSSRLSSEVVHVEKRQKLTEEPSLQAFPPNDLKQLLIACAKALHENNIKDFDQLVGKARDAVSINGEPIQRLGAYMVEGLVARKEASGKSIYHALRCREPEGEELLSYMQLLFEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQIAQGSQWMTLLQALAARPGGAPHVRITGIDDPVSRYARGGDGLDIVGKRLGLMSEKFGIPVEFHGVPVFSEEVTREMLDIRPGEALAVNFPLQLHHTADESVHVSNPRDGLLRLVKSLSPKVTTLVEQESNTNTTPFFNRFIETLDYYLAIFESIDASLLPRESKERINVEQHCLARDIVNIIACEGKERVERHELLGKWKSRLTMAGFTQSPLSSYVNSVIGILLKCYSEHYTLLEKDGAMLLGWKDRNLISASAWHC 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10767g00001 583 MobiDBLite consensus disorder prediction 138 152 - -
Vium10767g00001 583 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 167 578 IPR005202 -
Vium10767g00001 583 Pfam GRAS domain family 210 581 IPR005202 -
Vium10767g00001 583 MobiDBLite consensus disorder prediction 138 177 - -
Vium10767g00001 583 ProSiteProfiles GRAS family profile. 201 582 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10767g00001 Vium-Chr10767 19493 22917 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10767g00001 201 581 GRAS Transcription Factor Family AT1G50600 62.205 2.88e-170 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vium10767g00001 GRAS 5.3e-125 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium10767g00001 - - gmx:100799073 971.459