Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10701g00001 ATGAACCGTATATTGAAAGTGGTGCAAGAGTTGAAGCCTCTCTTACTGATGATGCTGGTGCAGGTTGCATATACTGGAAATACTGTAAGTACTAGCCTCGCCATAACTGATGGAATGAGCATTAAAGTATTCACTGCTTACCGTCAAATTTTCGGAGCAGCTATCACTATTATTCTTGCTCTTATTTTTGAGAGAAAGAACAGGCCAAAGTTGACATGGAGGGTGCTCTTGATGACATTTCTTTGCGGATTATTTGAAGGGAGTTTATTCCAAAATCTTTTTTTCACCGCCATAGCGTTGGTATCAGCAACATATGCTAACGCTATTTTCAACATGGTTCCTGTGATCACTTTTATCCTCTCCTTCCTGTGCGGCTATGAAAAGTTAAATTTGCAAACCACCGCAGGGAAAGCTAAGGTGATGGGAACGATAATTGGAGTTAATGGGACAATGATGTTGTCATTCTTTAAAGGAGTAGAAATAAATATTTGGAAAAATATTCACATTAATCTCATGCATAAAAAAGACAATAATGAGATAAGAGCATCTGATGGAAAAGAATGGATAGGTGTTCTAAGTGGTATTGGATGTTGCTTCAGTTTTTCAGTGTGGCTCATCATTCAGGCTAAGCTGAGTAAGGAATATCCAAGCCACCACTCAAGTACATCGTTAATGAATTCAATGGCGGCAGTACAAGCCACACTCTTTGCCCTTTGTGTTGAAAAAGATTGGAATCAATGGAAGTTGCCTTCAGCTATTAGGATTTTGGCGACACTCTATTCGGGAATTGCAGTCACTGCATTTGTGAATATTATCACTTCATGGTGTGTACGGAAGAAAGGTCCATTATATGTATCTGTATTCAATCCCCTTGAGCTTGTGCTCGTGGCTGCCACTGCTCCCCTCTTATTACAAGAGAAACTATACCTTGGAAGTGTACTTGGCGCATCGCTAATTGTGTGTGGCTTGTACATGGTGCTGTGGAGTAAAAGCAAAGAAATTAAACCACAAACTGATTTGGTGTTATCAGAGACAGAATTAAGTACGACTGAGGTTGTTGTAGTCTCTGCCAACGATAAGAGTGATCATGTTAGCAATAACCAGGTGAATAGTAATAGCAACACTGTAAACAAAGGCTCTTAA 1143 0.3963 MNRILKVVQELKPLLLMMLVQVAYTGNTVSTSLAITDGMSIKVFTAYRQIFGAAITIILALIFERKNRPKLTWRVLLMTFLCGLFEGSLFQNLFFTAIALVSATYANAIFNMVPVITFILSFLCGYEKLNLQTTAGKAKVMGTIIGVNGTMMLSFFKGVEINIWKNIHINLMHKKDNNEIRASDGKEWIGVLSGIGCCFSFSVWLIIQAKLSKEYPSHHSSTSLMNSMAAVQATLFALCVEKDWNQWKLPSAIRILATLYSGIAVTAFVNIITSWCVRKKGPLYVSVFNPLELVLVAATAPLLLQEKLYLGSVLGASLIVCGLYMVLWSKSKEIKPQTDLVLSETELSTTEVVVVSANDKSDHVSNNQVNSNSNTVNKGS 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10701g00001 380 PANTHER WAT1-RELATED PROTEIN 12 339 IPR030184 GO:0016020|GO:0022857
Vium10701g00001 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 148 - -
Vium10701g00001 380 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020
Vium10701g00001 380 Pfam EamA-like transporter family 12 138 IPR000620 GO:0016020
Vium10701g00001 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10701g00001 Vium-Chr10701 7029 12978 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10701g00001 11 378 Nodulin-like Gene Family AT1G25270 36.729 4.53e-83 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium10701g00001 - - vum:124820047 715.301