Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10685g00007 ATGTCGCTCAAGCGCCGCCCCGATGATGGCAAGACTCCAGACGACAAGCGGCGAAAGCCGCCTCCTTTCTCCAGTGTGGTGCGTGACGTGATGAGATTACAATCACTCGGGCACTTGCTGGAGCCAATTCTTGAGCCATTGGTTCGTAAAGTGGTTAAGGAAGAAGTTGAAGCAGCCCTAAAGAGACATTTAACCTGCATGAAACAGACCTGTGGAAAGGAATTGCATACTACTGAATTAAGAAATTTGCAGCTGCAGTTTGAAAACAGCATTTCTCTGCCTGTCTTTACTGGAGGTCGGATTGAAGGAGAAGATGGTTCTAACCTAAGAATAAGTTTAGTTGATGGCCTAACTGGAGAGGTTGTCTGTACAGGACCGGAATCGATGGCTAAGGTGGAAATTGTAGTTCTTGAGGGTGATTTTGAAGAAGAAAGTGATATTTGGATGCCCGAAGAGTTCAAGAGCAATATTGTGAGAGAGAGGGAAGGAAAAAAGCCCCTTCTTACAGGAGATGTAATTTTATATCTTAAAGATGGTGTTGGTATGGTGGGTGAAATTTCGTATACAGATAATTCAAGCTGGACAAGGAGCCGCAGGTTCAGGCTTGGGGCAAGAGTTGTGGACAACTTTGATGGTGTTAGAATAAGAGAAGCAAAGACAGAATCATTTATTGTCAGAGATCACAGGGGAGAATTGTATAAGAAGCACCATCCTCCTAGTATGTCTGATGAAGTTTGGAGATTGGAAAAGATAGGCAAGGATGGAGCTTTCCACAAACGTTTGAGTCGGGAAAAGATCCTTACTGTTAGAGAGTTTCTCACGCTTCTCAATCTGGATCCAGCAAAGCTGCGCAGTATACTGGGCACTGGGATGTCTGCAAAGATGTGGGAAGTAACTGTGGAGCATGCTCGAACTTGTGTACTTGATACAACTAGGCACGTGTACTTCCCTTCTAATTCTCAACAACATGGTGTGGTCTTCAATGCTGTGGGACAAGTCACTGGACTGCTTTCTGAATGCGAGTTGAGGCTCAAAGCACAGTTTCTAATGCATTGA 1056 0.446 MSLKRRPDDGKTPDDKRRKPPPFSSVVRDVMRLQSLGHLLEPILEPLVRKVVKEEVEAALKRHLTCMKQTCGKELHTTELRNLQLQFENSISLPVFTGGRIEGEDGSNLRISLVDGLTGEVVCTGPESMAKVEIVVLEGDFEEESDIWMPEEFKSNIVREREGKKPLLTGDVILYLKDGVGMVGEISYTDNSSWTRSRRFRLGARVVDNFDGVRIREAKTESFIVRDHRGELYKKHHPPSMSDEVWRLEKIGKDGAFHKRLSREKILTVREFLTLLNLDPAKLRSILGTGMSAKMWEVTVEHARTCVLDTTRHVYFPSNSQQHGVVFNAVGQVTGLLSECELRLKAQFLMH 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10685g00007 351 MobiDBLite consensus disorder prediction 1 23 - -
Vium10685g00007 351 Pfam Calmodulin binding protein central domain 241 306 IPR046830 -
Vium10685g00007 351 PANTHER OS02G0177800 PROTEIN 16 339 IPR012416 GO:0005516
Vium10685g00007 351 Pfam Calmodulin binding protein-like N-terminal domain 83 228 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10685g00007 Vium-Chr10685 29089 33464 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10685g00007 1 341 Calmodulin-binding Proteins AT5G62570 60.345 1.87e-151 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium10685g00007 - - gmx:100804548 605.905