Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10659g00004 ATGGTAGCCATTGTTGCTTCTTACAGTGTCTTTCCGAGTAAAGAAACTCCCAAAGTTCAATTATGGTTATCAGATAGTGACCAAGTCGTGCGTTCAGGTCACACACCCACTATCTATGTATACCAAGCAAAACACTATGATGGCACCACCCAGAGGTTGATAAACTCTCTTGCTCAGATTTTAGTGCCCTACTACCCACTTGCTGGTAGGTTGAGCTTAGCAGAAACTGGTCGAATTCAAGTGGATTGCAATGCCAAAGGAGTCACTTTTATTGAAGCCGAAACCACAAAATCATTGGCTGATTATGGAGACTTTTCACCTTCTGATTCTGTCAGGGAGCTTGTTCCAAAGATTGATTACACTCGACCCGTAAAGGAAATTCCTTTGTTGCTTGTGCAATCCACAAGATTCCATGGTGGTGAAGGTTTTGTCATTGGAGTGGCTTTCTGTCACCCTTTGGCTGATGGGTTTGGTGGCATTCAGTTCATCAATTCCTGGGCAAAACTGGCTCGCGGAGAGACACTTGAGCCATATGAATTGCCCTACCTTGATAGAACAATACTCAAACTCCAACACTCATCAACATCACCGTGCTTTGATCACCCCGAGTTGAAGCCTCTACCACTAAAACTAGGAAGCTCTGACATCAACGCTGAGGAAAGCAAGAAGACAAGGGCTGTGCTACTGAAACTGACGCAAGAACAGGTGCAGAAGCTGAAGAATGAGGCGAATGAAGAACCCTTGCAAGAAGGGGTGAGAGCTTATAGCAGATTTGAAGCTATTTCCGGTCATATATGGAGATGTGCAAGCAAGGCTCGTGAACTTGAAGAGAAGCAAGAAACGGTGGTTCGGTTCAATGCTGATATCCGTAGCAGACTGATTCCTCCTCTTCCTAGGAATTACTTTGGGAATGCTTTGGCAGCAACAGTGTCACCGAAATGCTATGTTGGAGAAATAGTGTCAAAGCCTTTGAGGTATGCTGCAGAAAAGGTAAGAGAAGCGATTGAAAAGCTTAGTAATGAGTACATAAGGTCACAACTGAGGATTGTGTTAGGAGAGGAGCAATTGGATTGCATAAGGGGTTTGTTCTTGGGAGAAGGAGAGCGTAGAAATGTTCCTTTTGCAGGGAATCCGAATCTTCAAATCACAAGCTGGATGAGCATGCCAGTGTATGGAGCAGATTTTGGATTGGGAAAGCCTGTGTTTTTCGGATTGGCATATGTTGCTTCGCAAGATAGGGCTGTGATTCTTCTGAGTCCAGATGGTGATGGATCCATTATTGTCTCCATGCACTTCCAAGAATCACATTTGGAGCTTTTCAAGAAATTGTTCTACCAGAGTTTGTGA 1347 0.4425 MVAIVASYSVFPSKETPKVQLWLSDSDQVVRSGHTPTIYVYQAKHYDGTTQRLINSLAQILVPYYPLAGRLSLAETGRIQVDCNAKGVTFIEAETTKSLADYGDFSPSDSVRELVPKIDYTRPVKEIPLLLVQSTRFHGGEGFVIGVAFCHPLADGFGGIQFINSWAKLARGETLEPYELPYLDRTILKLQHSSTSPCFDHPELKPLPLKLGSSDINAEESKKTRAVLLKLTQEQVQKLKNEANEEPLQEGVRAYSRFEAISGHIWRCASKARELEEKQETVVRFNADIRSRLIPPLPRNYFGNALAATVSPKCYVGEIVSKPLRYAAEKVREAIEKLSNEYIRSQLRIVLGEEQLDCIRGLFLGEGERRNVPFAGNPNLQITSWMSMPVYGADFGLGKPVFFGLAYVASQDRAVILLSPDGDGSIIVSMHFQESHLELFKKLFYQSL 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10659g00004 448 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 444 - -
Vium10659g00004 448 Gene3D - 1 206 IPR023213 -
Vium10659g00004 448 Coils Coil 328 348 - -
Vium10659g00004 448 Gene3D - 213 447 IPR023213 -
Vium10659g00004 448 Pfam Transferase family 1 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10659g00004 Vium-Chr10659 32115 33633 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10659g00004 2 446 Monolignol Biosynthesis Gene Families AT5G48930 36.971 2.60e-99 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium10659g00004 K13065 - gmx:100779814 689.493