Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10640g00001 ATGGTGTTTGCTGAATATGGATCAAGGTGGAAATTGCTGAGGAAACTAAGCAACCTGCACATGCTTGGAGGAAGGGCTCTTGATGAGTGGGGAAAGGTTCGAGAAGAAGAGATGGGGCAGATGCTGGGTAGCATGTACGAGTGTAGCAAGAGGGGTGAAGCTGTGGTGGTGCCTGAGATGCTCACTTACTCTATGGCCAACATGATAGGCCAAGTCATACTCAGTCGTCGAGTGTTCGAGACCAAGGGTTCTGACTCAAACCAGTTCAAGGACATGGTGGTCGAGCTCATGACTGTTGCAGGCTACTTCAACATTGGCGATTTTATACCCTTCTTGGCCAAATTGGACCTTCAAGGTATAGAGCGTGGGATGAAGCACTTGCACAACAAGTTTGATGTGTTGCTCACAAACATGATTCAGAACCATGTGGCTTCTAAGCATAAGAGAAAGAATAAACCCGATTTCTTGGACATGGTCATGGCTCATTATGGTGAAGACGACGCTCATGGGGACAAACTCTCATTCATCAACGTCAAAGCACTGCTACTCAACCTATTCACAGCGGGAACTGACACGTCTTCAAGCATCATAGAGTGGTCCTTAGCAGAGATGCTGAAGAACCCGAGCATCATGAAGAAGGCTCACGAGGAAATGGACAAAGTGATAGGCAGGGAGCGCCGCCTCAAAGAATCCGACATCCCAAACCTTCCCTACTTCCAAGCCATATGCAAAGAGACCTACAGAAAGCACCCTTCAACTCCTCTCAACCTCCCTCGAATCTCCAAACAACCATGCCAAGTTAACGGCTTCTACATCCCCGAGAACACTCGCTTGAGCGTCAACATCTGGGCCATTGGGAGAGACCCCCAAGTGTGGGACAAACCCCTCGAGTTTAAGCCAGAGAGGTTCTTGAGTGGCAGGAACAAAATGATCGACCCACGTGGCAATGACTTCGAGTTAATACCCTTCGGCGCCGGGCGAAGGATCTGCGCCGGCACCAGAATGGGGATTGTCTTAGTGCACTACATTTTGGGAACCTTGGTTCATTCCTTTGATTGGAAGGTGCCACGTGAAGTGGGGGAATTGAACATGGAGGAGGCCTTTGGTCTTGCCTTGCAGAAAAAGGTTCCTCTTGCTGCTTTGGTTACTCCTAGGTTGACTCCTAATGCTTACATTCCTTAG 1182 0.4907 MVFAEYGSRWKLLRKLSNLHMLGGRALDEWGKVREEEMGQMLGSMYECSKRGEAVVVPEMLTYSMANMIGQVILSRRVFETKGSDSNQFKDMVVELMTVAGYFNIGDFIPFLAKLDLQGIERGMKHLHNKFDVLLTNMIQNHVASKHKRKNKPDFLDMVMAHYGEDDAHGDKLSFINVKALLLNLFTAGTDTSSSIIEWSLAEMLKNPSIMKKAHEEMDKVIGRERRLKESDIPNLPYFQAICKETYRKHPSTPLNLPRISKQPCQVNGFYIPENTRLSVNIWAIGRDPQVWDKPLEFKPERFLSGRNKMIDPRGNDFELIPFGAGRRICAGTRMGIVLVHYILGTLVHSFDWKVPREVGELNMEEAFGLALQKKVPLAALVTPRLTPNAYIP 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10640g00001 393 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 382 - -
Vium10640g00001 393 SUPERFAMILY Cytochrome P450 2 385 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10640g00001 393 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 323 332 IPR017972 GO:0005506|GO:0016705
Vium10640g00001 393 PRINTS E-class P450 group I signature 177 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10640g00001 393 PRINTS E-class P450 group I signature 197 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10640g00001 393 PRINTS E-class P450 group I signature 240 258 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10640g00001 393 PRINTS E-class P450 group I signature 64 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10640g00001 393 PRINTS E-class P450 group I signature 281 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10640g00001 393 PRINTS E-class P450 group I signature 330 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10640g00001 393 PRINTS E-class P450 group I signature 320 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10640g00001 393 Gene3D Cytochrome P450 1 387 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10640g00001 393 Pfam Cytochrome P450 2 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10640g00001 393 FunFam Predicted protein 186 380 - -
Vium10640g00001 393 PRINTS P450 superfamily signature 321 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10640g00001 393 PRINTS P450 superfamily signature 188 205 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10640g00001 393 PRINTS P450 superfamily signature 241 252 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10640g00001 Vium-Chr10640 5660 9933 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10640g00001 1 391 Cytochrome P450 AT5G07990 45.960 1.68e-130 383