Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1063g00006 ATGGCAAATAGTAGCATAAACTTGGTGCTTCATCAAGGATCAACGTTGCCACATGAACTTCCTGTAGCTGCTGTACTGGGACCTTCGTGCTTTCATTCGTTTTCTTCAACTTGGGCTATTACCAATGGAGCCATTCATGTCTCACCACGAAGGGGGAACTGCAGTGCTACTTGTTATTGCTCAAGTTTCAGGAAATGTACGTGCAAATGGAAACGGCTTGTAAGAAGTTGCTCCACCAGTGAGTTTGTCATTGCCGGTGATGAAAACTATGGCAATAAGCAGGTTGTTAGTCTCACTCCTCGTCTCTACGACTATGTACTAAAAAATGTTCGAGAGCCAGAGATTCTAAGGCAATTGCGGCAGGAGACAGCCTCTATGCGTGGAAGTCAAATGCAGGTGTCCCCTGATCAGGCACAGCTGCTTACAATGCTTGTGCAGATTCTTGGAGCAGAACGGTGTATTGAAGTTGGCGTTTATACCGGATACTCATCATTAGCCATAGCATTAGTTCTGCCAGATTCAGGTCATTTAGTTGCCTGTGAAAGAGATGCCAAATCTCTTGAAGTTGCCAAGAAGTATTATCAACTAGCTGGTGTTTCACATAAGGTGGATGTAAAACTTGGACTTGCAATGGACTCCCTAGAATCTTTAATTCTGAATGGTGAAGCAGGAAGCTATGATTTTGCATTTATTGATGCCGAGAAAAGAATGAACGAGAAATATTTTGAACTGCTACTACAGCTGGTGAAGGTTGGAGGTCTTATTGTAATTGATAATGTCCTTTGGCATGGAAAAGTTGCTGACCAACTGGTTTATGACCCTAAAACTCTCAGCATTAGAAATTTTAACCAGAAGTTAATGGAAGATGAGCGCGTAGACATCACTATGGTACCTATTGGAGACGGGATGACGATCTGCCGAAAACGCTGA 930 0.4301 MANSSINLVLHQGSTLPHELPVAAVLGPSCFHSFSSTWAITNGAIHVSPRRGNCSATCYCSSFRKCTCKWKRLVRSCSTSEFVIAGDENYGNKQVVSLTPRLYDYVLKNVREPEILRQLRQETASMRGSQMQVSPDQAQLLTMLVQILGAERCIEVGVYTGYSSLAIALVLPDSGHLVACERDAKSLEVAKKYYQLAGVSHKVDVKLGLAMDSLESLILNGEAGSYDFAFIDAEKRMNEKYFELLLQLVKVGGLIVIDNVLWHGKVADQLVYDPKTLSIRNFNQKLMEDERVDITMVPIGDGMTICRKR 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1063g00006 309 Gene3D Vaccinia Virus protein VP39 93 309 IPR029063 -
Vium1063g00006 309 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 107 309 IPR029063 -
Vium1063g00006 309 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 92 309 IPR002935 GO:0008171
Vium1063g00006 309 PANTHER O-METHYLTRANSFERASE-RELATED 92 308 - -
Vium1063g00006 309 Pfam O-methyltransferase 110 308 IPR002935 GO:0008171
Vium1063g00006 309 CDD AdoMet_MTases 152 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1063g00006 Vium-Chr1063 144097 148030 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1063g00006 71 297 Monolignol Biosynthesis Gene Families AT3G62000 73.913 1.26e-124 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1063g00006 - - gmx:100776619 547.74