Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10636g00001 ATGGCGGCCGGCCGCCGGCAGACAGCAAAGACCCCGGAAGAAGATCAGAGAACCTTCTCTGATACCATGTTAGAAAGAGCCTTTGCTCACTATACAACAGGCAAGGCTCCTTACCATTTGCGTGTTCATGTTGCTGCTAATAGGAAATGGCGTACCCTGAAATTTCAGTTTTTTGTCACCAAAGGCATTCTGTTTATTTTTTTGTCTGTTAAGCTTGTCATTGCATCACTAACATATTTGGTTTATTTAATTGATGGTTATCAACAATATTGGCTTCGTCTTCTTTGGGGTTTTGATAGTGAAATGAGCTTTTACTACATATGTGGAGCTCTATTATTTTTCATACCACTTGGCTTATCTGGGTGCTTCATTACTTGTTATGACCGAAGAGTTCGCAATGACTTAGCTCAACCTTGTAGAGAGTTATGTCTTTGTTGCTGTCAACCTGGAGTTTATGCAGACTGTCATTTGCCTGACACTCTTTGTATGTGGACTGATTGCACCACTTGCTTTGAGAGTTGGGGAACCATGGAAATTGAATGTGCTGGCTGTTTGGGGGGTGCTGGTGAAGCAGGGCTACCATTAGTCATATTGTCGAGTATGTTTTTGGAGTTGTAA 618 0.4207 MAAGRRQTAKTPEEDQRTFSDTMLERAFAHYTTGKAPYHLRVHVAANRKWRTLKFQFFVTKGILFIFLSVKLVIASLTYLVYLIDGYQQYWLRLLWGFDSEMSFYYICGALLFFIPLGLSGCFITCYDRRVRNDLAQPCRELCLCCCQPGVYADCHLPDTLCMWTDCTTCFESWGTMEIECAGCLGGAGEAGLPLVILSSMFLEL 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10636g00001 205 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 25 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10636g00001 Vium-Chr10636 14299 18092 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10636g00001 27 203 C3H Transcription Factor Family AT2G22120 71.751 5.78e-86 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium10636g00001 - - vum:124819989 419.853