Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10630g00001 ATGGCAGAAGTTGGAAAACGCTTCCTAGAGTATCAACTTATCGTCGATAATCCCAATCCTGCAGGTTTACTGGTATGTCCACAACTGGTGGCAGGAACGATAGCGTTTACATTTGTGGCACCACCAAAAGCTCTTCTTGGTATAGAGACCATGGGACATCTAGGTCTCATCTACAATGTCTTCCTAACTGGCTTGGAGATGAACCTAGACGCTATCCTGCTAGCAAGAAGAATGGCCACAACCATTGCTATGGTTAGCACCATCATTCCAATGTTATTAGGAGCTGCAATATATTCTATGGCTCAAGCTCTCTACAAGGGTCCTAACCTTGACATGTCACTTTACAACACACCTAGTGCATATTTATTCTGGGCTTTGGTCCTCAGTGTCACAAACTTCCCTGTCCTCGCTCACATTCTTGCTGATCTTAAGATCCTCTATACAGAGCTAGGTAGATTGGCTGTAACTGCAGCCACAATAAGCGACTTCTACAATTGGGCAATGTTTGTGTTGCTCATCCCATTTGCTTGTCATAGTCAAAGACCCTTTCTCTCGGTGATATTAACCATTTTCTTTATGCTCTTCTGCTACTTGGTGTTGCGCCCATTCCTTACCAAGTTGTTGAATAAGGAAACAGAAAATAATGAGTGGGACAATTACAAGTTATCGTATGTTCTGGTTGGTGTTTTGGCTTGTGCACAAGTGACTGAAATTCTAGGTACACATTCCGTTGTTGGAGCGTTGGTGTATGGATTGATGCTTCCTCGTGGAAAATTTACTGACATGTTGATCGAAAGGTCAGATGATCTTGTCTCCATGTACCTGGAACCGTTGTTCTTTGTTGGCTGTGGCATAAGATTCGACTTTTCTAGTTTTAAACTGCACAAAGTTCTTAACGTGATCATAATTATTGTCATGTCATGCTTCACTAAGATTGTGAGCACTGTAATAACTGCATGGTTCTATGGCATGCCTTTTCGAGACGGTGTGGCACTTGGAGCACTTTTGAACACCAAAGGCATCTTGCCGTTAGTAATGCTAAACATTGCAATTGACAGACAGATTGTGAGCACTGTAATAACTGCATGGTTCTATGGCATGCCTTTTCGAGACGGTGTGGCACTTGGAGCACTTTTGAACACCAAAGGCATCTTGCCGTTAGTAATGCTAAACATTGCAATTGACAGACAGATTTTGAGTAGGGATTTCTATACAATCATGGTTGTGGCCAGTGTTGTGATGACCATACTAGTGACTCCGACAATCAACTTCATATACAAGCCAAGAAAGCAGTTTAAGAAAAACAAGCTGAGGACTGTGCAAAACTTGAAGGCTGATGCAGAAATCAGAATTATGGTCTGCGTTCACAACCCTCGCCATGCCACAGGAATGATGAGCATTCTCGAAGCATGCAGTTGCGCCAATGCCACCCATCTACGCGTGTTTGCTCTTCAACTCATTGAGCTGAAAGGACGTGGCACTGCCTTTCTGATAGACGAGGGCGGTGGTTCCCAACAATCACAAGCAGACACTGAGAGCATCAGAGATATCTTCTCAGAGTTCAAACTAGAACGAGGGCTCACCAACGCTAGCGTGGAGACTCTCGCTGCAGTGTCCTCCTATGAGACCATTCACAAGGACATCTACAACATAGCTGACGAGAGACAGACGTCCTTGATTCTCCTTCCGTTCCACAAACATTCAGGCGTGGAGGGTGCCCTAGAGGAGACAAACCCTGTGTTCAGAGAGATAAACAGAAATGTGATGCGCTATGCACCATGTTCTGTGGGAATCTTGGTTGACCGTGGACACAGGTTACCGTCTGAGATGAACATGTATGTTGCCATTGTCTTCATTGGAGGGCCTGATGACCGTGAAGCCTTGGCTATTGCTTGGAGAATGGCAAGGCATAAAAGGATTCATCTCTCAATGGTAAATATTCTTCTGTTTGGAAAGGTTGCTGAAGTGGATACAAGTGAAACAATCAATGATGAAGCCAACGGGATACTGTCCCCTATGTTGGACAGTGTAAGGGAAAAGGAGTTGGACGAGGAGTATATGAGTTTGTTCAGACTCATGGCAGTGAACAATGAGCATTCCGTAACTTATTCAGAGAAGGAAGTGCACACTGCTGATGATATTCCGTTGGTTCTGGATGAATTGGAAAGGGAGGGCTATGATTTGTATGTTCTAGGGCATGGAAAAAGAAGGAACTCTACGGTGCTGTCAAAATTGTTAGAATGGACTGATTGTCCTGAACTTGGGGTTATGGGGGACATGCTTGCATCGAATACTTTGGGTTCATGCTCTTCGGTGCTTGTGGTGCAACAGTATGGGTTTGGAGGTATGAACTTGAGGTCTATTAACCAAACCACATGTGAAAGCAATGATGACGACATTGAAGCAATTTTTAAGGTCAAGAGCATCAAATATAATTGGTGA 2442 0.4398 MAEVGKRFLEYQLIVDNPNPAGLLVCPQLVAGTIAFTFVAPPKALLGIETMGHLGLIYNVFLTGLEMNLDAILLARRMATTIAMVSTIIPMLLGAAIYSMAQALYKGPNLDMSLYNTPSAYLFWALVLSVTNFPVLAHILADLKILYTELGRLAVTAATISDFYNWAMFVLLIPFACHSQRPFLSVILTIFFMLFCYLVLRPFLTKLLNKETENNEWDNYKLSYVLVGVLACAQVTEILGTHSVVGALVYGLMLPRGKFTDMLIERSDDLVSMYLEPLFFVGCGIRFDFSSFKLHKVLNVIIIIVMSCFTKIVSTVITAWFYGMPFRDGVALGALLNTKGILPLVMLNIAIDRQIVSTVITAWFYGMPFRDGVALGALLNTKGILPLVMLNIAIDRQILSRDFYTIMVVASVVMTILVTPTINFIYKPRKQFKKNKLRTVQNLKADAEIRIMVCVHNPRHATGMMSILEACSCANATHLRVFALQLIELKGRGTAFLIDEGGGSQQSQADTESIRDIFSEFKLERGLTNASVETLAAVSSYETIHKDIYNIADERQTSLILLPFHKHSGVEGALEETNPVFREINRNVMRYAPCSVGILVDRGHRLPSEMNMYVAIVFIGGPDDREALAIAWRMARHKRIHLSMVNILLFGKVAEVDTSETINDEANGILSPMLDSVREKELDEEYMSLFRLMAVNNEHSVTYSEKEVHTADDIPLVLDELEREGYDLYVLGHGKRRNSTVLSKLLEWTDCPELGVMGDMLASNTLGSCSSVLVVQQYGFGGMNLRSINQTTCESNDDDIEAIFKVKSIKYNW 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10630g00001 813 Pfam Sodium/hydrogen exchanger family 30 357 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vium10630g00001 813 PANTHER CATION/H + ANTIPORTER 354 778 - -
Vium10630g00001 813 Gene3D - 449 758 - -
Vium10630g00001 813 Gene3D - 21 365 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10630g00001 Vium-Chr10630 3006 6133 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10630g00001 21 778 Antiporter Super Family AT2G13620 33.892 1.75e-153 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium10630g00001 - - vum:124819980 1603.19