Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10585g00004 ATGGATTTGTTCCTTGTGAGTAACCTAAACACCACTGCATTTGCTCTCTTTTCTCTAACATTACTATTAGCTTTCTCTCTGTTTCGCTTTCGTCCCTCCAAAGCTGGTAGTAATCTGCCAGAACCTCCAATGGCCTCTGGTGCATGGCCCATACTCGGCCATCTCATGCTTCTCGGGGGCTCACCAACACCCCACAAGACGTTGGCAGCCATGGCTGACAAATATGGACCCCTCTTCACCATCAAGCTCGGTTCTAGACGCGCTTTGGTTCTCAGCAACTGGAAAATGGCGAAAGAATGTTACACCACAAACGACGTCGTCGTCTCCTCTCGCTCCAAGCTCGTGGCCATCGAACACGTTGCGTACAACCAAGCAAGTTTTGGGTTCGCACCCTATGGTCCTTACTGGCGTGAGATACGGAAGATTGTGACCGTGTTCCTCTCCGACCGCAAAACGGAGCTTCTAACCCGCGTTAGGGTTTCTGAGATTCGAAGTTCTGTTAAAGAGCTGTTTCATGTTTGGTCGGAGAAGAAGGGGAGTGATGAGTGTGTGGTGGTGGAGATGAAGCAGTGGTTCACAGAGTTGGTGTTCAATATAGTTTTCCAAACCATGGCTGGGAAGCGATTATTTGGTAAAACCGCAGTGGTTAGCGAGAAAGATGCAGAAAAGTGTGTGAAGGCTTTGAGGGAGTTCATGCAGATGTTGGGAGTGTGCACGGTGGCTGATGCTGTTCCTGTTCTGAGGTGGATGAATTTGGGAGTGAAAGCCATGAAAGAAACTGCCAAAGAATTGGATGTGATCTTAGATGAGTGGTTGGTGGAGCACAGCAAGAAGAGGGCTTTATTTGGTGAAAAGGGTGTTGAAAGTGACGACCAAGACTTCATGGATACGATGCTTTCAGTTCTTGAAGGTGCCACCATCGATGGCTTCGATGCTGCTACTATAAACAAAGCCACAACACTGAAAAATTATACTTTACGCGCGCCTTATAAAACAAAAGGAAAATGTTTGTTCGACAACAATATTTTGCCAACTTTTTGA 1041 0.4697 MDLFLVSNLNTTAFALFSLTLLLAFSLFRFRPSKAGSNLPEPPMASGAWPILGHLMLLGGSPTPHKTLAAMADKYGPLFTIKLGSRRALVLSNWKMAKECYTTNDVVVSSRSKLVAIEHVAYNQASFGFAPYGPYWREIRKIVTVFLSDRKTELLTRVRVSEIRSSVKELFHVWSEKKGSDECVVVEMKQWFTELVFNIVFQTMAGKRLFGKTAVVSEKDAEKCVKALREFMQMLGVCTVADAVPVLRWMNLGVKAMKETAKELDVILDEWLVEHSKKRALFGEKGVESDDQDFMDTMLSVLEGATIDGFDAATINKATTLKNYTLRAPYKTKGKCLFDNNILPTF 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10585g00004 346 Gene3D Cytochrome P450 32 323 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10585g00004 346 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10585g00004 346 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10585g00004 346 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10585g00004 346 SUPERFAMILY Cytochrome P450 47 306 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10585g00004 346 Pfam Cytochrome P450 44 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10585g00004 346 PANTHER CYTOCHROME P450 82C3-RELATED 20 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10585g00004 Vium-Chr10585 57499 58788 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10585g00004 9 321 Cytochrome P450 AT4G31940 41.486 4.69e-78 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium10585g00004 - - pvu:PHAVU_004G021100g 484.952