Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10557g00002 ATGGCTCGTTTTGAAAAAGATGAGGTTCCTATGCTGTCTGAAACGCGTGCTCAACTGTCTGATGAATTCGTGGATTCTAATTTCCGGAGGCTAGTATCTAGAACACGAAGTGCTTCAATTTCGATTCCCATGGCTTCCTTGGAATCATATGAGAAAGAAACTAGTCTTGTGGGACATACCGGTCCCCTTCGTAGTGTGAGAAAAACCCCCTTTGTGCAGATGAGTGGTCCACTGTATGCTACCCATGGAACTTCAAATCTTTCAGGACAGAATATAGCTGCTACAGGAAACAAAGTAGTGGAAAGTAAGACAGAAAACTTTTCTACTTTCAATGGCACAAATGAAAATCGTTGGGATAATGACTATGACAGAAAGAATGAACACTTAATGAGGTCTGGGCAACTGGGAATGTGTAATGATCCTTATTGTACTACTTGCCCCACTTATTTCAAGGCTGCTCAGCCAAGAACTCGAAAAACTTCAGCTATATTTGATCCCAAGTTCCACCATGTTTTTTATGTAGATGCCAATGGTTTTGGCCGAAAATTTTTTTCCTTCTGCTATTCATATGTTCCTGGAGTTATGAATCCTCATGCAAAAGTTGTACAACAATGGAACAAGATCTTGGCCATTTTTTGCTTGGTGGCAATTTTTGTTGATCCATTATTTTTCTTCTTATTATATGTGAAGGAGGATGATAAATGTATTGCTATCAATTGGACAATGACAACAACACTTGTTTTTTTTAGAAGCATTAATGATTTGATATATTTCTTTAACATTCTTCTCCAGTTTAGGCTGGCTTATGTTTCTCCTGAGTCAATGGTAGTAGGTGCTGGAGATTTAGTTGACCAACCCAAGAAAATTGCTCTTAATTATCTGAAGAGTTATCTTTTTATCGACCTATTTGTTGTATTTCCTCTTCCTCAGGTAAACTTCTTACCTTCTCCCTTTTTGATTTGTGGTAACTTTTTATTATATTGTTTCCTTGCCTGA 996 0.3765 MARFEKDEVPMLSETRAQLSDEFVDSNFRRLVSRTRSASISIPMASLESYEKETSLVGHTGPLRSVRKTPFVQMSGPLYATHGTSNLSGQNIAATGNKVVESKTENFSTFNGTNENRWDNDYDRKNEHLMRSGQLGMCNDPYCTTCPTYFKAAQPRTRKTSAIFDPKFHHVFYVDANGFGRKFFSFCYSYVPGVMNPHAKVVQQWNKILAIFCLVAIFVDPLFFFLLYVKEDDKCIAINWTMTTTLVFFRSINDLIYFFNILLQFRLAYVSPESMVVGAGDLVDQPKKIALNYLKSYLFIDLFVVFPLPQVNFLPSPFLICGNFLLYCFLA 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10557g00002 331 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 138 313 - -
Vium10557g00002 331 SUPERFAMILY Voltage-gated potassium channels 200 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10557g00002 Vium-Chr10557 7401 11772 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10557g00002 5 314 Ion Channels AT3G17700 50.160 1.87e-101 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium10557g00002 K05391 - vum:124819897 680.248