Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10537g00001 ATGGAAGAGATAGTAGGACAGTTGAGGGAATACTTCAAGACTGAAAAAACCAGAAGTGTAACATGGAGGAAAAACCAGCTCACAGGTATCTTAGACCTTATTCATGAAAACGAAGATGCTATATTCAAAGCCCTTCATCTAGATCTTGGAAAGCACCCTGTTGAGGCTTACCGTGATGAGGTTGGAGGAGTAGAAAAATCAGTCAACAAATCTTTGAGCTGTGTTGAGAAATGGATGGCTCCTAAAAAGAGTGATATTCCTTTGCTCTTCTTTCCAGCTAAAGGACAAGTATTTTCAGAACCCTTAGGTGTGGTGCTCATATTTTCTTCTTGGAACTTCCCAATCATGCTGTCATTGGATCCATTAATTGGGGCAATATCTGCTGGAAATGTTGTACTGATAAAACCTTCAGAGCAAGCTCCAGCTTGCTCTTCTTTCCTTGCCAATACCATTCCTCGGTATTTGGACTCTAAAGCCATCAAGGTGATTGAGGGTGGATCAAATGTTTGTGAACAACTACTGCAGCAAAAATGGGACAAAATCTTCTTCACTGGAAGTCCAAGTGTTGGAAGCATGGTCATGTCTGCTGCTGCAAAGAATTTAACACCTGTTACTCTAGAGTTGGGTGGAAAATGCCCTGCCATACTTGATTCCCTTCCCAATCCTTCAGAATTTAAGTTGGCAGTCAAAAGAATTATAGGAGGAAAGTGGGGACCTTGCAGTGGACAAGCTTGCATAGGAATAGACTATTTGCTTGTTGAGGATCATTTATCATATTCTCTGATAGAGCTATTAAAGAAGATAATCAAAAGATTTTATGGTGAAAACCCGGTGGAGTCAAAAGTAATTTCCAGAATAGTAAACAAGCATCACTTTCAGAGAATACGCAATCTTCTCAAAGAACCTCTTGTTGCTGCCTCCATCGTTCACGGTGGTTTTATCGATGAAGAAAACCTGTTCATCGAGCCTACAATCTTGCTAGACCCTCCACTAGATTCTCAGATAATGACAGAAGAAATATTTGGTCCATTGCTTCCTATAATCACACTGAATAAAATTCAAGAAAGCATTGAATTTATCAATGCAAAACCGAAACCTCTTGCCATTTATGCTTTCACCAAAGATGAAACTTTCAAGAGAAAAATTATATCAGAAACATCCTCAGGAAGTGTCATATTTAATGACACCTTGGTTCAATTTTTATGTGATACGCTACCATTTGGAGGTGTTGGACAGAGTGGTTTTGGAAGGTACCATGGGAAGTACTCCTTTGACAGTTTCAGCCATGAAAAGGCAGTAATGCATAGAAACCTGTTCCTTGAAATCGAGCCAAGGTACCCTCCTTGGAGTCAGTTCAAGCTAGAGTTTCTCAAACTCGCCTACAGGCTCAACTACTTTGGACTATTACTGCACATGTTAGCCTTCAAACTCGGCTTCAAAAAATACAACTAG 1452 0.4001 MEEIVGQLREYFKTEKTRSVTWRKNQLTGILDLIHENEDAIFKALHLDLGKHPVEAYRDEVGGVEKSVNKSLSCVEKWMAPKKSDIPLLFFPAKGQVFSEPLGVVLIFSSWNFPIMLSLDPLIGAISAGNVVLIKPSEQAPACSSFLANTIPRYLDSKAIKVIEGGSNVCEQLLQQKWDKIFFTGSPSVGSMVMSAAAKNLTPVTLELGGKCPAILDSLPNPSEFKLAVKRIIGGKWGPCSGQACIGIDYLLVEDHLSYSLIELLKKIIKRFYGENPVESKVISRIVNKHHFQRIRNLLKEPLVAASIVHGGFIDEENLFIEPTILLDPPLDSQIMTEEIFGPLLPIITLNKIQESIEFINAKPKPLAIYAFTKDETFKRKIISETSSGSVIFNDTLVQFLCDTLPFGGVGQSGFGRYHGKYSFDSFSHEKAVMHRNLFLEIEPRYPPWSQFKLEFLKLAYRLNYFGLLLHMLAFKLGFKKYN 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10537g00001 483 SUPERFAMILY ALDH-like 2 448 IPR016161 GO:0016491
Vium10537g00001 483 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 9 431 IPR016162 GO:0016491
Vium10537g00001 483 FunFam Aldehyde dehydrogenase 210 413 - -
Vium10537g00001 483 FunFam Aldehyde dehydrogenase 9 213 - -
Vium10537g00001 483 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 210 413 IPR016163 GO:0016620
Vium10537g00001 483 PIRSF ALDH 1 474 IPR012394 GO:0006081
Vium10537g00001 483 Pfam Aldehyde dehydrogenase family 3 433 IPR015590 GO:0016491
Vium10537g00001 483 PANTHER ALDEHYDE DEHYDROGENASE 1 475 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10537g00001 Vium-Chr10537 642 4270 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10537g00001 1 476 Aldehyde Dehydrogenase Gene Family AT4G36250 61.975 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium10537g00001 K00128 - gmx:100809812 854.744