Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10535g00002 ATGGAATACAACCTTATCAACCTCCTTTACCTTTTCATTTTTGTCATCACTTTGAAACTGTTGTTTTTCAGAAGGTTGAAAAACCCACCACCGTCTCCACCGTCTCTTCCAATAATCGGCAACCTATATCAGCTGAAAAAACAGCCAGTGCACCGCGCCTTGCATGGCCTCTCACAGAAATACGGTCCTATCCTCTCTCTCCGGTTCGGATCTCAACCCATCCTCGTCGTTTCATCAGCATCTGCGGCGGAAGAATGTTTCACAAAAAACGACATCGTTTTCGCGAATCGTTTTCACTCTTCCACTTCCAAGTATCTTGGCTTCAACAACACCATTATCACGGCATCATCGTACGGCGACCACTGGCGCAACTTGCGTCGTATCAGCTCTCTAGAAATCCTCTCTAATCACCGTCTTAACTCGTTTTTGGGAGTACGAAAGGACGAGACTATGAAGTTGCTTCGAAAGATGGTTAGAATCTCTGGTAAAGAAGAATCAGCGAAAGTAGAGCTGAGACCCATGTTTGCAGAACTCACGTTCAACATAGTCATCAGAATGGTGTGTGGAAAACGTTACTACGGTGAGGAACACGACGGCACCACCGCTGAGGAGGCTAAGAAGTTCAGAGAGCTCATGGATGAGATATCGCAATTTGGGTTGGGGTCCAACCTCGGAGATTTTGTGCCACTTTTCAGAATTTTTCGGAGTAACAAAAAGTTACGAAAGGTTGGAGAGAAGCTAGATGCGTTCTTCCAAGGACTCATTGATGAACATCGGAATAAGAAGGAAAGTTCAAATACCATGATCGACCATTTGCTTTCTTCGCAGAAGTCACAACCTGACTATTACACTGACCAGATCATCAAGGGACTTATTATGGCATTTTATGTGGCTGGAACAGAGACTTCCGCTGTAGCATTAGAGTGGGCAATGTCTAATCTGTTGAACAACCCAGAGATATTGGAGAAATTAAGAATTGAAATCGACATGGAAGTTGGAGTAGAGCGTTTTATGGAGGAAGCAGACGTTACTAAATTACCATACCTTCAGAATGTTATATCTGAGACTCTACGATTACATCCACCACTGCCCATGTTTTTGCCCCATCTATCCTCTGAAGATTGCAATGTGGGAGGTTATGACGTACCACGTAACACTATGTTAATGGTGAATGCGTGGGCCATACATAGGGACCCGAAGCTTTGGTCTGACCCGACAAGCTTCAAGCCCGAAAGGTTTCAGAATGACCCAGTGGCTGCACACAAATTAATGCCTTTTGGGTTGGGAAGGAGGGCATGTCCTGGTGTTGGCATGGCCCAAAGAACTATGGGCTTGACTTTGGGCCTATTGATTCAATGCTTTGAGTGGAAAAGAGTTGGTGAGGAAGAAATTGACCTCACCGAAGGACGAGGAACTATTGTGGCCAAGGCAATTCCATTGGAGGCTCGATGCAAAGCACGTCCAATAGTTAGGAAGATTTTCTAA 1485 0.4498 MEYNLINLLYLFIFVITLKLLFFRRLKNPPPSPPSLPIIGNLYQLKKQPVHRALHGLSQKYGPILSLRFGSQPILVVSSASAAEECFTKNDIVFANRFHSSTSKYLGFNNTIITASSYGDHWRNLRRISSLEILSNHRLNSFLGVRKDETMKLLRKMVRISGKEESAKVELRPMFAELTFNIVIRMVCGKRYYGEEHDGTTAEEAKKFRELMDEISQFGLGSNLGDFVPLFRIFRSNKKLRKVGEKLDAFFQGLIDEHRNKKESSNTMIDHLLSSQKSQPDYYTDQIIKGLIMAFYVAGTETSAVALEWAMSNLLNNPEILEKLRIEIDMEVGVERFMEEADVTKLPYLQNVISETLRLHPPLPMFLPHLSSEDCNVGGYDVPRNTMLMVNAWAIHRDPKLWSDPTSFKPERFQNDPVAAHKLMPFGLGRRACPGVGMAQRTMGLTLGLLIQCFEWKRVGEEEIDLTEGRGTIVAKAIPLEARCKARPIVRKIF 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10535g00002 494 Gene3D Cytochrome P450 23 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10535g00002 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Vium10535g00002 494 PRINTS P450 superfamily signature 433 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10535g00002 494 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10535g00002 494 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10535g00002 494 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10535g00002 494 FunFam Cytochrome P450 family protein 22 490 - -
Vium10535g00002 494 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10535g00002 494 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10535g00002 494 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10535g00002 494 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10535g00002 494 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10535g00002 494 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10535g00002 494 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10535g00002 494 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10535g00002 494 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10535g00002 494 CDD CYP81 62 480 - -
Vium10535g00002 494 SUPERFAMILY Cytochrome P450 30 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10535g00002 494 Pfam Cytochrome P450 30 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10535g00002 494 PANTHER CYTOCHROME P450 82C3-RELATED 12 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10535g00002 Vium-Chr10535 3774 5687 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10535g00002 8 494 Cytochrome P450 AT4G37370 53.831 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium10535g00002 K13260 - gmx:100804509 826.624