Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1047g00005 ATGGGAGTGCCTTCTTTGCTGTTGCTCTTCTCTTACTTTCTCCTTTCCCTCCTATTCATACTTTTCAGTCTCAAGTTCCTGTTGGGAAGCAGAAGAGTCAGGAATCTGCCACCGGGGCCTTCTCCTCTGCCCATAATAGGAAATCTCAACCTCATCGAACAACCCATCCACCGCTTCTTTCAACGAACTTCCGAGCATTACGGCAAAGTCATCTCCCTCTGGTTCGGTTCCCGTCTCGCCGTCGTAATCTCTTCACACTCGGCATTCCAAGAATGTTTCACCAAACACGACCTTGCCTTGGCCAACCGACTTCCCTCTCTCTCCGGAAAATACATTTTCTACGACAACACCACCGTCGGCTCCTGTTCCCACGGTGACCACTGGCGCAACCTCCGCCGCATCACCGCCCTCGACGTTCTCTCCACCCAGCGAGTCCACTCTTTCTCCGGAATCCGAAGCGACGAGACCCGGCGCTTGATTCACAGGCTGGCCAGGAACTCGCGCCAGGGTTTTGCTCGCGTGGAGATAACTTCCATGTTCAACGACTTGACCTACAACAACGTCATGAGGATGATATCCGGGAAGAGGTTTTACGGGGAGGAGACCGACATGAAGAACGTGGAGGAAGCCAGGGAGTTCAGAGAGACCGTGGCGGAGATGCTGCAACTCATGGGCTTGGCTCAGGCGATGCTATTTGGAGGAACGGACTCGTCGACGGGAACTCTGGAGTGGTCGTTGTCGAATTTGTTGAATAAGGCAGAAGTGATGGAGAAGGCGAGAGAGGAGTTGAAGAGAGTGGTGGGGGAAGATCGGTTGTTGAATGAGACAGACCTTCCAAAACTTTGTTATCTTAGGAAAATAATTCTTGAGACACTCAGGTTGTATCCGCCGGCTCCAGTGCTCATACCACACGTTACTTCGGAGGATATAAGTGTGGGAGGATTCGATGTGCCTCGGGACACAGCAGTGATCATCAATGGGTGGGCGATGCAGAGAGATCCTGAGATGTGGGATGAAGCGACATGCTTTAAACCAGAGAGGTTTGATGTTGAAGGAGAAGAGAAAAAGTTGGTTGCATTTGGGATGGGAAGAAGGGCTTGCCCAGGAGAAGCCATGGCCATGCAAAGCGTTAGCTATACTTTGGGTTTGTTGATTCAATGTTTCGATTGGAAACGAGTGAACGATGAAAAAGTTGATATGAGAGAGAATAATTGGATCACTTTGTCAAGGTTAATTCCTCTTCAAGCCATGTGCAAGACCCGCCCGCTCTACGCTCAACTTTCCTCAAATTAG 1293 0.505 MGVPSLLLLFSYFLLSLLFILFSLKFLLGSRRVRNLPPGPSPLPIIGNLNLIEQPIHRFFQRTSEHYGKVISLWFGSRLAVVISSHSAFQECFTKHDLALANRLPSLSGKYIFYDNTTVGSCSHGDHWRNLRRITALDVLSTQRVHSFSGIRSDETRRLIHRLARNSRQGFARVEITSMFNDLTYNNVMRMISGKRFYGEETDMKNVEEAREFRETVAEMLQLMGLAQAMLFGGTDSSTGTLEWSLSNLLNKAEVMEKAREELKRVVGEDRLLNETDLPKLCYLRKIILETLRLYPPAPVLIPHVTSEDISVGGFDVPRDTAVIINGWAMQRDPEMWDEATCFKPERFDVEGEEKKLVAFGMGRRACPGEAMAMQSVSYTLGLLIQCFDWKRVNDEKVDMRENNWITLSRLIPLQAMCKTRPLYAQLSSN 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1047g00005 430 Gene3D Cytochrome P450 223 416 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1047g00005 430 PRINTS P450 superfamily signature 286 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1047g00005 430 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1047g00005 430 PRINTS P450 superfamily signature 233 250 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1047g00005 430 PRINTS P450 superfamily signature 358 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1047g00005 430 Pfam Cytochrome P450 225 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1047g00005 430 Pfam Cytochrome P450 37 220 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1047g00005 430 Coils Coil 246 266 - -
Vium1047g00005 430 PRINTS E-class P450 group I signature 326 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1047g00005 430 PRINTS E-class P450 group I signature 285 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1047g00005 430 PRINTS E-class P450 group I signature 357 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1047g00005 430 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1047g00005 430 PRINTS E-class P450 group I signature 367 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1047g00005 430 SUPERFAMILY Cytochrome P450 37 421 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1047g00005 430 PANTHER CYTOCHROME P450 82C3-RELATED 228 421 - -
Vium1047g00005 430 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 360 369 IPR017972 GO:0005506|GO:0016705
Vium1047g00005 430 Gene3D Cytochrome P450 29 222 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1047g00005 Vium-Chr1047 47621 49473 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1047g00005 13 422 Cytochrome P450 AT4G37370 42.443 9.50e-137 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1047g00005 K13260 - tcc:18601857 380.563