Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1047g00001 ATGATAGATCATCTTCTCACTCTGCAGGAATCACAGCCTCAATATTACAGTGATCATATCATCAAAGGCCTTGTTCTGGCAATGCTGTTCGCGGGCACAGATTCTTCTGCCGTGACGTTAGAATGGTCACTGTCAAATTTATTAAACCACCCAGAAATGTTGAAAAAAGCAAGAGATGAATTGGACTTTAACGTCGGAAAAGATCGCTTGGTAAACGAGTCAGACCTTCCAAAACTGACATACCTTAAGAAGATAATACTCGAAACACTGAGATTGCACCCTCCTGCTCCACTGGCAATACCACACGTGTCCTCGGAAGACGTCATCATTGAGGGATTCAACGTTCCACGAGACACCCTAGTGATGGCTAACATCTGGGCCATGCACAGAGACCCAGCGACGTGGACTGAAGCGACAAGTTTCAAACCGGAGAGGTTTGATGAAGAGGGATTGGAGAAAAAGGTAGTTGCGTTTGGAATGGGAAGAAGGGCTTGA 495 0.4566 MIDHLLTLQESQPQYYSDHIIKGLVLAMLFAGTDSSAVTLEWSLSNLLNHPEMLKKARDELDFNVGKDRLVNESDLPKLTYLKKIILETLRLHPPAPLAIPHVSSEDVIIEGFNVPRDTLVMANIWAMHRDPATWTEATSFKPERFDEEGLEKKVVAFGMGRRA 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1047g00001 164 Gene3D Cytochrome P450 1 164 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1047g00001 164 SUPERFAMILY Cytochrome P450 1 163 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1047g00001 164 PANTHER CYTOCHROME P450 82C3-RELATED 1 164 - -
Vium1047g00001 164 PRINTS P450 superfamily signature 84 95 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1047g00001 164 PRINTS P450 superfamily signature 31 48 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1047g00001 164 PRINTS P450 superfamily signature 156 164 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1047g00001 164 PRINTS E-class P450 group I signature 20 37 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1047g00001 164 PRINTS E-class P450 group I signature 40 66 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1047g00001 164 PRINTS E-class P450 group I signature 124 148 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1047g00001 164 PRINTS E-class P450 group I signature 155 164 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1047g00001 164 PRINTS E-class P450 group I signature 83 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1047g00001 164 Pfam Cytochrome P450 2 164 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1047g00001 Vium-Chr1047 7 1171 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1047g00001 1 164 Cytochrome P450 AT4G37370 60.366 2.36e-73 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1047g00001 K13260 K24542 gmx:100790507 287.73