LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vium10470g00001	ATGTGTTCTGAAAATGGAGATTTTTCTGTGCATGTGACGAACGAAGAGGTGGTGGCAGCAGTGTTACCAATGCAGGAACATTGGCTTCCACTCTCTAACCTTGACCTGCTTCTACCTCCATTGGATGTAGGAGTATTCTTTTGCTACAAGAACCCTATTATCACATCCAAACCCATGGAAGATAGTGCCACCAACAAAATCAGCTTTGGAACCATGGTGGGGTCTTTGAAGAAGGCCTTGGCACAAACCCTAGTCTCTTATTATGTGTTTGCAGGTGAAGTCATGCTCAACAGCATGGGTGAACCTGAAGTTCTCTGTAACAATCGTGGTGTTGATTTTGTTGAAGCTCAGGCAGATGTTGAACTCAAGAACCTCAACTTTTACAACCCAGACCAATCTATTGAAGGCAAGTTTGTTCCAAAGAAGAAGAATGGTGTGCTTGTTGTACAGACAACCGCACTTAAGTGTGGAGGAATAATAGTGGCATGTACATTTGATCATCGCATATCAGATGCATATTCAACAAACATGTTTCTTGTTTCATGGGCTGCCATGGCCCACCCCACAATTACCATTCTCTCCACCACTTCCTGCCATCCATGTTTTCGTCGTTCTCTTCTCAATCCTCGTCGTCCAGGTTCCATCCACCCTTCTTTGAATCAAATGTACACTTCTATCTCCCATCTCCCTCCC	693	0.443	MCSENGDFSVHVTNEEVVAAVLPMQEHWLPLSNLDLLLPPLDVGVFFCYKNPIITSKPMEDSATNKISFGTMVGSLKKALAQTLVSYYVFAGEVMLNSMGEPEVLCNNRGVDFVEAQADVELKNLNFYNPDQSIEGKFVPKKKNGVLVVQTTALKCGGIIVACTFDHRISDAYSTNMFLVSWAAMAHPTITILSTTSCHPCFRRSLLNPRRPGSIHPSLNQMYTSISHLPP	231

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vium10470g00001	231	Gene3D	-	7	222	IPR023213	-
	Vium10470g00001	231	Pfam	Transferase family	9	214	-	-
	Vium10470g00001	231	PANTHER	TRICHOTHECENE 3-O-ACETYLTRANSFERASE	22	216	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vium10470g00001	Vium-Chr10470	57	3229	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vium10470g00001	76	212	Monolignol Biosynthesis Gene Families	AT5G48930	27.778	3.92e-12	63.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vium10470g00001	-		-	vum:124819812	455.677