Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10434g00003 ATGAAAGTGGTAGATGTATTCAACGTAGCTCCAACTTCAGAATCGAAAGAGTTGCCAACTCAAACAACGCTTCCCCTCACCTTCTTTGACATATTATGGCTAAGGCTGCCTCCTGTTGAACGCATCTTCTTCTATCAATTTCCTCATCCAACTCTTCTCTTCTTCGATACCCTTCTTCCCAAACTCAAACTCTCTCTCTCTCTCGCACTTGCCCACTTTTTCCCTCTCGCCGGACACCTCACTTGGCCCCTTCACTCCCAAATCCCCATCCTCACTTACAAATCCGGTGACACTGTTTCCCTCACTGTAGCTGAATCTGATGCTGATTTCGACCATCTAGCAGGCACGGATCTTGCTGAGGCTAGAGAAATCCACCACCTTTTACCCCACTTGACCATATCCCACGATCAAGCAAATGTTCTAGCCTTGCAAGTCACTCTATTTCCAAACTCTGGATTTTCCATAGCAATAACCTCACACCATGCTGTTCTAGATGGCAAGACTTCAACCTCGTTTATCAAAGCCTGGGCTTATCTTTGCAGAGATCAACCACAATCAACTTTTTCTCTGCCACCTGAACTCTCTCCGTTTTTTGGCAGGGAGGTAGTCCAAGACCCCAATCATTTAGAACAAAAATTTGTCAGCGATTGGTTAAGACAGGGTGGACCCAACAACAGAAGCCTCGTAGCTTGGGATCTGCAAGTCCCAGACGATGCAACCAGAGGCGTGTTTCATCTCGGTCGTTCAGATATTGAAAAGCTGAAGCAGATTGTGGTGTCGAAGAAGAAAGGGAACAGCAGCAACCTCCGGTTGTCAACTTTTGTGTTATCCGTTGGTTATGCTTGGGTTTGCAGGGTGAGAGCAGAGGAAACAAAAAACAAAATGGTTACGTTGGCTTTGAACATTGACTGCAGGAGTCGTTTGGAGCCGCCACTTCCCGCAACGTATTTTGGGAACTGTGTAGGGGCGAGGCTTGCAAGTGCTGAAACAAAGGAGATATTGGGGGAGGATGGACTCATTGTGGCAGTGGATGCACTGAATGAGAGTTTGGAAACTCTGAAAGAGGGAGCGCTGAGCGGGGCGGAAAATTGGTCAAAGTGGTTGCTTGAAGGTTTCAAAGTTGATACGAAGATAATTGGCGTTGCTGGGTCACCGAGGTTTGATGCTTATAGTAATGACTTTGGTTGGGGAAGACCAAAGAAGGTTGAGATAGCTACTATAGACAGAACTGCCGCATTTTGTTTATCAGATAGCAGAAATGGTGACGGGGTTGAGATAGGTTTTGTGTCCACCAAAGAAGCAATGCACACTTTTGCGTCTCTCTTTCTCAACGGCCTTCTCCAATCTTGA 1350 0.4652 MKVVDVFNVAPTSESKELPTQTTLPLTFFDILWLRLPPVERIFFYQFPHPTLLFFDTLLPKLKLSLSLALAHFFPLAGHLTWPLHSQIPILTYKSGDTVSLTVAESDADFDHLAGTDLAEAREIHHLLPHLTISHDQANVLALQVTLFPNSGFSIAITSHHAVLDGKTSTSFIKAWAYLCRDQPQSTFSLPPELSPFFGREVVQDPNHLEQKFVSDWLRQGGPNNRSLVAWDLQVPDDATRGVFHLGRSDIEKLKQIVVSKKKGNSSNLRLSTFVLSVGYAWVCRVRAEETKNKMVTLALNIDCRSRLEPPLPATYFGNCVGARLASAETKEILGEDGLIVAVDALNESLETLKEGALSGAENWSKWLLEGFKVDTKIIGVAGSPRFDAYSNDFGWGRPKKVEIATIDRTAAFCLSDSRNGDGVEIGFVSTKEAMHTFASLFLNGLLQS 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10434g00003 449 Pfam Transferase family 15 440 - -
Vium10434g00003 449 Gene3D - 235 447 IPR023213 -
Vium10434g00003 449 PANTHER - 2 446 - -
Vium10434g00003 449 Gene3D - 1 227 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10434g00003 Vium-Chr10434 30915 32794 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10434g00003 42 438 Monolignol Biosynthesis Gene Families AT5G48930 25.301 2.45e-22 97.1