Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10434g00001 ATGCATGTGGTACAAGTTTTCAGTATAGCACCAACTTTGGAATCAGAAGAATTACCAACTCAAACATCGCTTCCCCTCACCTTCTTTGACATACTGTGGTTAAGGTCACCTCCTATTCAACGCATCCTCTTCTACCAATTCTCTCACCCTACCCCACCCTTCTTCCATACCCTTCTTCCCAAACTCATACACTCTCTTTCTCTTACACTCGGCCACTTTTTTCCTCTTGCGGGCCACCTCACTTGGCCCCTTCACTCCCATAACCCCATCATCAATTACAAAACGGGTGACTCTGTTTCTCTCACAGCAGCTGAATCTGATGCAGATTTCAACCATCTAGCCGGCTCAAATCTTTGGAAAACTGAAGAAATGCACCATCTTTTACCTCACTTGACCATATCACATGAACAGGCTACGCTTTTAGCCTTGCAAATCACTCTGTTTCCAAACTCTGGATTTTCCATTGGAATAACCTCACACCGTGCTGTTCTTGATGCCAAGACTTCAACATCGTTTATCAAGTCCTGGGCTTATCTTTGTAGAGAATCACGCGCACCCCCTTGTTTGCCACCTGAACTATGTCCTTTCTATGAAAGGATACTAGTAAAAGACCCTGACCAAATAGGGGGGAAGTTCCTCAATGATTGGTTAATGCAGGGAGGATCCAATAAAAGAAGCCTCATGGTTCGGGATGTGCAATCTCCGGAACATGCAACTGGAGGCTTATTTAAATTGTCTGGTTCAGATATTGAAAGGCTGAAGCATTTTGTTGTGTCTAAACAGAGACAGAACAACATCAACATTCATTTGTCAACGTTTGTGTTGTCTCTTGCCTATGCATGGGTTTGCAGGGTGAGAGCCGAGGAAATGAAAAACGAGAGAGTTATGTTGATTCTGACTGTGGATTGCAGGGGTTGTTTGGAGCCACCTCTTCCTCCGACCTATTTTGGTAACTGTGTTGGATTAAGACTTGCAATTGCTGAAAGAAGAGAATTGTTGGGGGAGGATGGACTAATTGTGGCTGTGGAAGCACTGAGTGAAGCTTTGGAAAGTGTGAAGAAGGAGGGTGTTCTGATTGGAGCTGAAAATTGGTCATCATGGTTGCTTGATTGTGTGGGAGGTGAAGCTGATGTGAAGGCGATTGGAGTTGCGGGCTCACCGAATTTTGAGGCTTACAGCAGTGACTTTGGCTGGGGAGGACCAAAGAAGGTGGAGACAGTGTCTATTGAAAGAACTGCAGTGTTTAGTCTTTCAGATAGCAACAATGGAGAAGGAATTGAGATAGGTTTTGTGTCCAAGAAAACAACAATGGAGACCTTTGCTTCTCTTTTTGCTAAAGGACTTCAATCTTGA 1353 0.4427 MHVVQVFSIAPTLESEELPTQTSLPLTFFDILWLRSPPIQRILFYQFSHPTPPFFHTLLPKLIHSLSLTLGHFFPLAGHLTWPLHSHNPIINYKTGDSVSLTAAESDADFNHLAGSNLWKTEEMHHLLPHLTISHEQATLLALQITLFPNSGFSIGITSHRAVLDAKTSTSFIKSWAYLCRESRAPPCLPPELCPFYERILVKDPDQIGGKFLNDWLMQGGSNKRSLMVRDVQSPEHATGGLFKLSGSDIERLKHFVVSKQRQNNINIHLSTFVLSLAYAWVCRVRAEEMKNERVMLILTVDCRGCLEPPLPPTYFGNCVGLRLAIAERRELLGEDGLIVAVEALSEALESVKKEGVLIGAENWSSWLLDCVGGEADVKAIGVAGSPNFEAYSSDFGWGGPKKVETVSIERTAVFSLSDSNNGEGIEIGFVSKKTTMETFASLFAKGLQS 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10434g00001 450 Gene3D - 1 228 IPR023213 -
Vium10434g00001 450 Pfam Transferase family 15 442 - -
Vium10434g00001 450 PANTHER - 3 449 - -
Vium10434g00001 450 Gene3D - 235 450 IPR023213 -
Vium10434g00001 450 SUPERFAMILY CoA-dependent acyltransferases 243 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10434g00001 Vium-Chr10434 4978 6505 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10434g00001 65 401 Monolignol Biosynthesis Gene Families AT5G48930 23.529 3.91e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium10434g00001 - - vun:114186114 817.764