Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10419g00002 ATGGAGAAGCAGAAAAGTGAGAAGGAAGGGTGTGAGAATGTGAGGCTGTTACAAAAAAGTGTGAAGAAGCTTCACTTTGGAAGCTGGGAAGAGAAAGACGTGGCAGCAAAGGAGATAGAAAGGTTGGCTAAAGAATATGAGAAGGTGAGGGAATTGGCGACTGAGCTTGGGGTGGTCAGGGTGTTGGTTTCCATGGCGCTTTCCGACGTCGCTAGCCGCCGCCGAGTAGCACTCAAGGCATTGATCCACCTATCCAATGGAAATCACAAGAACAAGGCTTTGATAGTGGAAGCAGGACTGTTGTGCAAACTGCCTAAGAAAATTGACCTTGAAGATGAATCAATAAGAGAGTTTGCAGATTTGCTCTCTTCGTTATCATCTCTTGGAAACATCCAATTTCCTCATTCTTCATTAGACTTTCTCCAATTTCTTATAGACATTCTAAAGTCGTGCCCAAGCTTTGATACAAAAGAGTCGTGTTTGGTAGCCATGTGCAACATCTCAACCGTGCTAGAGAATGCAGGGCCTTTGATTTCTAATGGGGTTGTACCTATTCTCTTGGAACTGTGCTCAGAGAAAGGAACTTCAGAGAAAGCACTTACCATCCTTGGGAACTTGGGGGTGACTTCAATGGGAAAGAAAACATTGGAGAACAGCTCAATTGTGCCAAAATGCTTGATTGAGATCTTATCTTGGGAAGATGAACCCAAATGCCAAGAGTTGTCAACTAATATTCTGATTATTCTGGCTCATAAAAATTCAACACAGAGAAGTAAAATGGTACAGTCAGGGATTGTTCCTGTACTTCTTCAAGTAGCTTTATTAGGGAGTTCTTCGGCCCAGAAAAGAGCACGGAAATTATTGCGATGGTTCAGGGATGAAAGCCAAATAGAAATGGGGCCACATTTAGGCCCACAGTCTTCAAGAATTGCATATGTAACACTTAAAAATCAAAGAGACACAGAAGAAGGGAGGAGAACGATGAAGAGTTTAGTGAGAGAAAGTCTGCATAGGAATATGGAAATAATAACTAAAAGAGTTAATGCAGGTGAGGATTCTTCTAATGGGCTTAAGTCCCTGGTTACCAGCACAAGCTCCAAAAGTTTGCCAAACTGA 1116 0.4238 MEKQKSEKEGCENVRLLQKSVKKLHFGSWEEKDVAAKEIERLAKEYEKVRELATELGVVRVLVSMALSDVASRRRVALKALIHLSNGNHKNKALIVEAGLLCKLPKKIDLEDESIREFADLLSSLSSLGNIQFPHSSLDFLQFLIDILKSCPSFDTKESCLVAMCNISTVLENAGPLISNGVVPILLELCSEKGTSEKALTILGNLGVTSMGKKTLENSSIVPKCLIEILSWEDEPKCQELSTNILIILAHKNSTQRSKMVQSGIVPVLLQVALLGSSSAQKRARKLLRWFRDESQIEMGPHLGPQSSRIAYVTLKNQRDTEEGRRTMKSLVRESLHRNMEIITKRVNAGEDSSNGLKSLVTSTSSKSLPN 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10419g00002 371 Gene3D - 15 290 IPR011989 -
Vium10419g00002 371 Coils Coil 32 56 - -
Vium10419g00002 371 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 4 370 - -
Vium10419g00002 371 SUPERFAMILY ARM repeat 21 281 IPR016024 -
Vium10419g00002 371 MobiDBLite consensus disorder prediction 348 371 - -
Vium10419g00002 371 MobiDBLite consensus disorder prediction 345 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10419g00002 Vium-Chr10419 25072 26679 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10419g00002 30 296 U-box Gene Family AT1G67530 27.007 6.61e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium10419g00002 - - var:108327871 659.833