Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10415g00001 ATGGGATCTCAAGGTGGGGCAATCCAGGAGCCAAAGAATGGGTCTTTGGCAAGGCAAGGGTCTTTGTACAATCTCACCCTTGATGAGGTGCACAACCAGCTTGGAAATTTGGGGAAACCCTTAGGAAGCATGAATCTTGATGAGCTGCTCAAGGGTGTGTGGACTGCAGAATCTGGAACTGATGCATACATGCAGCAAGGTCAGGTAGCTTATGCTGGATCATCTTTGAATCCTCAAGGGAGTCTAACATTGTGTGGGGATCTTAGCAAGAAAACAATTGATGAGGTTTGGAGAGATATGCAACAGAAGAAGAGTGTTAGTCAGGAAAGAGAAAGACAGCCTACACTGGGTGAGATGACCCTGGAGGATTTCTTGGTGAAGGCTGGTGTGACTACTGACCCTTTCCCTAATGACGATAGTGCCATGGCCATGCCAGGGGTTGATTCCCAACACAACACATCACAACATGCTCATTGGCTGCAATACCAGCTCACCTCAGTGCAGGAGCAGCCACAACAACAACATCATCAACATCAAAATCAGCAGAATACTATGATGCCGGGTTTTTCGGGTTTTATGGCTGTTCAACAGCCTATGCCGGTTGTGGTGAATCCGGTTCTGGATGCAGGATACTCTGAAGCAATGCCGTCTTCTTTGATGGGTGCCTTATCTGATTCACAATCTGCAGGTAGGAAAAGGGCTGCCTCAGGTAATGTGGTTGAGAAAACTGTGGAGAGGAGGCAAAAGAGAATGATTAAAAATAGGGAATCAGCAGCTTGGTCCCGGGCTAGAAAGCAGGCTTACACACAAGAACTGGAGATTAAAGTTTCCCGTTTAGAAGAAGAGAATGAAAGGCTTAGAAGACAGAATGAGATAGAGAAGGTATTGCCAACTGCACCACCACCTGATCCTAAGCATCAACTGCGCAGAACTAGTTCAGCTCCCCTTTGA 951 0.469 MGSQGGAIQEPKNGSLARQGSLYNLTLDEVHNQLGNLGKPLGSMNLDELLKGVWTAESGTDAYMQQGQVAYAGSSLNPQGSLTLCGDLSKKTIDEVWRDMQQKKSVSQERERQPTLGEMTLEDFLVKAGVTTDPFPNDDSAMAMPGVDSQHNTSQHAHWLQYQLTSVQEQPQQQHHQHQNQQNTMMPGFSGFMAVQQPMPVVVNPVLDAGYSEAMPSSLMGALSDSQSAGRKRAASGNVVEKTVERRQKRMIKNRESAAWSRARKQAYTQELEIKVSRLEEENERLRRQNEIEKVLPTAPPPDPKHQLRRTSSAPL 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10415g00001 316 CDD bZIP_plant_BZIP46 246 291 - -
Vium10415g00001 316 SMART brlzneu 242 299 IPR004827 GO:0003700|GO:0006355
Vium10415g00001 316 SUPERFAMILY Leucine zipper domain 246 291 IPR046347 GO:0003700|GO:0006355
Vium10415g00001 316 Pfam bZIP transcription factor 246 291 IPR004827 GO:0003700|GO:0006355
Vium10415g00001 316 MobiDBLite consensus disorder prediction 279 316 - -
Vium10415g00001 316 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 244 296 - -
Vium10415g00001 316 Coils Coil 262 296 - -
Vium10415g00001 316 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 244 289 IPR004827 GO:0003700|GO:0006355
Vium10415g00001 316 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 16 315 IPR043452 GO:0003700|GO:0045893
Vium10415g00001 316 Gene3D - 244 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10415g00001 Vium-Chr10415 35263 39698 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10415g00001 1 316 bZIP Transcription Factor Family AT3G56850 56.000 6.51e-105 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vium10415g00001 bZIP_1 3.7e-12 CL0018