Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1039g00010 ATGGTCTTTGCTAGAATTGCTTCACTTGTCTCCACCAAATTCCCCAATTCAAACTCCTCCTCTTCTCTATCCAACAACATTCGAATTTCTCCCTCTCTCCAGGACCTCTCCTCGTACCGTCATGTTGACGCCACGGTGCCCCTTCACAAGCTTCCAACACCCTCCTCTTCCTCGCGCCGCAGATGCCTCAAAATCGTTCTCTTCATTGCATCGTTCTTCCTCCTAAGCTACCTCATCTTCTTCCTCCTTTACTCCTATTGGAACCATGGTTCCGGCAAGTACTACGTTGTACTCGATTGCGGCAGCACCGGCACGCGCGTTTTTGTCTACCACACTTCCGTTCGGTTCCAACGTCGTAGCAATCTTCCAATTGCTGTTGACTCCTCGAGGAATAGCTTGCACAAGAAGCCTCGTGGCCGAGCCTATGATCGAGTGGAGACCGAGCCTGGAATTGATAAACTAGTGCGCAACGTGTCTGGGTTGCACAAGGCGTTGAAGCCGTTGCTTAGGTGGGCCAAGAAGCAGATTCCAGTTCATGCTCATAAGTCTACTTCGTTGTTTCTTTGTGCCACTGCTGGGGTGAGGAGGCTTCCGGTTATTGATTCTATGTGGCTGTTAGATAATGCTTGGACTGTGCTTAAAAACTCTCCCTTTATGTGTGAGAGGGATTGGGTTAGGATTATCTCTGGCCCCGAGGAGGCTTATTATGGGTGGATTGCCCTTAATTATGATAATGGCATTTTGGGGGCTAGGCCTAGGAAGGCTACTTATGGCGCACTTGATTTGGGTGGCTCTTCCTTGCAGGTTACGTTTGAGAGTGATCAACAAATGAATAATGATACTAGTTTGTATGTTAGCATTGGATCTGTTAGACATCATCTCACTGCTTATTCGCTCCCGGGGTACGGTCTGAATGAGGCGTTTGGTAAGTCTGTGGACTATCTATATAGGAAGGAGTTTGCTTTAGGTAATTTTGATGTAGGTAGTAGTGGAAATATTGAGTTGAAACATCCTTGCTTGCAGGATGGGTATAGGGATGAATACTTTTGTTCTCGTTGTTCATCTGATAACAAAGGTAGGAAAGAATTGGGTGGGGGTGGAGGGTTGGGAACTTCATTAGTGCTTGTTGGTGCTCCTAATTGGAAGGAGTGCAGTGCAGTAGCGAAAGTTGCTGTGAATTTGTCTGAATGGCATGATCTTGGCGCAGGGCTTGATTGTGCAGCGCAGCCTTGTGCATTGCGTGACAGTATGCCTCGCCCCTATGGACATTTTTATGTGATTTCTGGATTTTATGTTGTATTTAGGTTTTTCAACTTGACTTCTGAGGCTACTCTTGATGATGTGTTGGCAAAGGGTAAGGATTTTTGTGAAAAGAAATGGGATGTTGCAAAGGCAAGTGTTGTTCCGCAACCCTTTATTGATCAGTATTGCTTTAGGGCACCGTACATTACTTCTCTGCTTAGGGAGGGTTTGCACATTAATGATAATCAGATAAGTGTTGGCTCCGGAAGTATCACTTGGACACTTGGGGTTGCCTTGTTGGAAGCTGGAAAGGCATTTTCCACTAGATTTGGGATTCGTGATTTGGAGTTGTTCCGGATCAAGATAAATCCTCTTGCTGTTGTGCCTATTTTGTTACTTTCTTTTATTCTACTTCTTTGTGCTTTATCATGTATTGGCAAATGGATTCCAAGGTTTGTCCGGAGGCAATATCTTCCCATTTCCAGGCATAACAGTGTTTCTGCTGCTTCTGTTCTTAACATGCCATCTCCTTTTCGGTTCCAGCATTGGAGTCCAGTGAACTCTGGGGATGGAAGGTCAAAAATGCCACTCAGCCCAAAAATTACAGATTCACAACAAAGTCCGTTTAATCTGGGGCATGGACTTGACGACAACAATGGTGGCATCGAGCTTATGGAGTCTTCATCGTACCCATCAGCCAGTAATGTTTCACACAGTTATTCCTCAAACAGTTTAGGGCAGATGCAGTTTGACAGTAGCAACATGGGTGCCTTCTGGTCCTCCTACAGGACTCAGATGCATCTGCAGAGTAGGCGATCGCAGTCTCGAGAAGATCTCAATTCCTCATTGGCTGAAGTTCATCTGGTCAAGAGTTAG 2118 0.4575 MVFARIASLVSTKFPNSNSSSSLSNNIRISPSLQDLSSYRHVDATVPLHKLPTPSSSSRRRCLKIVLFIASFFLLSYLIFFLLYSYWNHGSGKYYVVLDCGSTGTRVFVYHTSVRFQRRSNLPIAVDSSRNSLHKKPRGRAYDRVETEPGIDKLVRNVSGLHKALKPLLRWAKKQIPVHAHKSTSLFLCATAGVRRLPVIDSMWLLDNAWTVLKNSPFMCERDWVRIISGPEEAYYGWIALNYDNGILGARPRKATYGALDLGGSSLQVTFESDQQMNNDTSLYVSIGSVRHHLTAYSLPGYGLNEAFGKSVDYLYRKEFALGNFDVGSSGNIELKHPCLQDGYRDEYFCSRCSSDNKGRKELGGGGGLGTSLVLVGAPNWKECSAVAKVAVNLSEWHDLGAGLDCAAQPCALRDSMPRPYGHFYVISGFYVVFRFFNLTSEATLDDVLAKGKDFCEKKWDVAKASVVPQPFIDQYCFRAPYITSLLREGLHINDNQISVGSGSITWTLGVALLEAGKAFSTRFGIRDLELFRIKINPLAVVPILLLSFILLLCALSCIGKWIPRFVRRQYLPISRHNSVSAASVLNMPSPFRFQHWSPVNSGDGRSKMPLSPKITDSQQSPFNLGHGLDDNNGGIELMESSSYPSASNVSHSYSSNSLGQMQFDSSNMGAFWSSYRTQMHLQSRRSQSREDLNSSLAEVHLVKS 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1039g00010 705 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 64 521 IPR000407 GO:0016787
Vium1039g00010 705 Gene3D - 86 228 - -
Vium1039g00010 705 Gene3D Exopolyphosphatase. Domain 2 229 502 - -
Vium1039g00010 705 Pfam GDA1/CD39 (nucleoside phosphatase) family 90 514 IPR000407 GO:0016787
Vium1039g00010 705 MobiDBLite consensus disorder prediction 684 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1039g00010 Vium-Chr1039 53594 56510 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1039g00010 25 704 Nodulin-like Gene Family AT4G19180 55.114 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1039g00010 - - gmx:100787212 1075.85