Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1039g00007 ATGGTATTGTATCGTGGTCCAGCTTTGATAGGATATGCTGATATGAATCTTGCTATACAAAATGAAATAAGTGCCAAAGGTCAGCCAGAGCCATCTGGGTGGCTAATTGGTAGTTTACAGGACTTCGGGTTAGACCATTTTCATCTTGGGGTTCTGTGCTTGATAGGGAACTGCATTTGTATGGCTGCGTTTCTAGCCATTCAGGCACCAGTATTAAAAAAATATCCTGCAAATATATCGGTCACAGCATTTTCATACTCCTTCGGAGCTTTACTAATGGTTATAGTGTCATTATTCATGAATTATGAGGCAACTGACTGGACTTTGACATCATCAGAAATCCTTGCTGTTATGTATGCTGGAACTGTTGCATCTGCCCTTAACTATGGACTCATTACATGGTGTAACAAAATCTTGGGGCCAGCCATGGTTTCCCTTTACAATCCGCTTCAACCTGCGTTTTCAGCCATCCTCTCCCAAATTTTCCTTGGAAGTCCAATTTACTTGGGAAGCATCATAGGAGGTTCTTTTATCATTACTGGTCTATATTTAGTTACTTGGGCATCATTTAGAGAAAAACGAGCATCTCTTGGAGTTGGAGGAGCTAGTCCTTCCTCTTGGGTCTCTGAACCACTTGTTCACGACAGAATTGCACTCCAGAAAGGCCACGCTTTCTCTGGGTCCTCCTCCCTTTCCTCCAAAACCTTATCAGATTAA 717 0.4226 MVLYRGPALIGYADMNLAIQNEISAKGQPEPSGWLIGSLQDFGLDHFHLGVLCLIGNCICMAAFLAIQAPVLKKYPANISVTAFSYSFGALLMVIVSLFMNYEATDWTLTSSEILAVMYAGTVASALNYGLITWCNKILGPAMVSLYNPLQPAFSAILSQIFLGSPIYLGSIIGGSFIITGLYLVTWASFREKRASLGVGGASPSSWVSEPLVHDRIALQKGHAFSGSSSLSSKTLSD 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1039g00007 238 PANTHER WAT1-RELATED PROTEIN 1 193 IPR030184 GO:0016020|GO:0022857
Vium1039g00007 238 Pfam EamA-like transporter family 49 186 IPR000620 GO:0016020
Vium1039g00007 238 SUPERFAMILY Multidrug resistance efflux transporter EmrE 88 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1039g00007 Vium-Chr1039 45309 48980 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1039g00007 1 214 Nodulin-like Gene Family AT5G45370 58.796 5.43e-88 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1039g00007 - - gmx:100787738 352.443