Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10393g00004 ATGGAGTCTAAAGAAGCAGCAAGTGTTATTTTAAATTTGATGGGTCTTGATAAAGTGCCTAACCAACATCCTGTCAGAGATAAACAGAAAGTGCTCTCTGAGAATTACCAGCAGAAAGTTGCTTCCATTGGTGTCAGAAGGAAGCGTTCATCTTATCAGCATCATTCCTTTGGAATGAATACTAGTGAAAAGGACAAATCTGAGGATGTTTTAGAAGTGATCAAAGCACTCAGGAGAAGTAAGCATCATAACCCATCAAAAGGAAATGGGAAAGAGAATCCCAGTTCTAGCAAAAATTCTCAGTTGGCTGATGGGCTGCTCCAAGAGATATGTTATCCTGAAAAGCAATATAGAAAGAAAAAATCTAGTCACATGAATTTTGGTAAGGCAAGTTCAAGATCTTTCAGTAAAATTTCAGAGGAGATTTCTATGCAATCCGGAAATGTTGCAAATGGAGTTTTACATAGTGCATCAACTTCTTTTTTCAGAGGGAAAGAAGTTCTTTCCAATGATATGCTGAAGCCTGCTTTAAATATTTCAGTTAATGAGATCCAATTCAATTTCCCAATCTTCTGTTCAGATGGTTCATATATAGGCTCTCAAGCCAGGAGGAAAACTTTGGAACAGAGGGATGTGACTGAAAAGGTTCATGAACTTAGACCATTTGGTCGAGACTGTATACATAACCAATTGCATATGATCTGGGAAAAAGGGAATGGAGCAAGAAATTTGACTCATCAAAGGGGATATGGTAATGTTAGAATTAAGGCTGATGATAATTATAGCTTTGCTAGAAGAGTGCCAAGACCTCTTCGTTCAGCTTCAACTCTTACTGATAATTGTGGAACTATGAATCAGGATATCTTGTTTCATAGATATTGGGGTTTGAGAAAAAATGCATCCTCAAATTGGTCATCATGGAACTCGAAGTATCAATATAATGACCAGAAAGAATGTTTAGAAGACGTGAACCTCAGTTCTAGGGGTGAGAAATTCCCTTCCTTTTGCTCATATTTCAATAGTGATCATACTGAATTGCCAAGTTCTAGTTCTTCTCCCACCTTTATAGACGAACAGATGTTTCAAGAGAGAAACGTAATGAATGATGAAGTGAAGAACAGAAAGTATGATGACAGTAATATGTGGAAGCAAAATGTTGTGTCTCTTCACTCGTCAGTTGAATTCTTGGTATCTGATGCAACAGCTGAGGTTGTTGACTGGACACATAGTCCAACCGAACATCAATCTAAATCAACAGCCTTCGTTTTGTCACAAGAAATTGATTGTTTGAATCATACTTCATATACCTCAAAGCAGCAGGATAGATCAGATTTTAATGAAGGTTCTGTTCATTCGCTTTGCCATGAGGTTCACCCAGATTCCCTTGGTAGCTCTGTGGAGTCATGTGAACCAAGTCCAATCTCTGTTTTGGATCCCTTATTTGGAGAAGACATTCAATTCGGCTATAAAAGTGACGATCATATATATGATTCATCTGAGGTGGATGATGAAGAATGTGGTTTGAATGTTTCAAGTGATGAAGATTGTGAGAATGAATATGCACATAACTCTCAAGGAAAGAAAGAACTAGCAGGATTAGTTAGAGCTGAAGAAAGTAGGGATTTCTCATACGTTGTTGAGGTTTTAACAGAGGCAAGTATATTTAATAGGAACTTGTTTACGGACTTTTCTACATGGCACTCTTCACAATGTCCAATTAGTCCTTCCGTCTTTGAAAATCTGGAAAAGAAATTTGGCCAACAACAGTTTTGGAGCAGATCTGAAAGGAAACTGCTCTTTGATTGCATTAACATTGGGTTGATTCAGATTCTTGAGCCATGCTTATTTGTTCCAATGTGGGAAAAGTCAACATCAAGAAGATTGAATGTTGAACTAAACCAGAACATTATTGAAGATGAGATGTGGGGGTTGCTTGTTGTGCAAGAAAAGAAAGCAAGTAATGAGTATGCAGACCATACACTTGAAGGGAAGATTAGATGGACAGAACTAGTTGAAGATGTTGAGGATATTGTTACAGAGATAGTTAATTTGGTAACAGAGGAGCTTGCAAACGAGATAGTTCTCTCTGTAAATTTTTGA 2100 0.3748 MESKEAASVILNLMGLDKVPNQHPVRDKQKVLSENYQQKVASIGVRRKRSSYQHHSFGMNTSEKDKSEDVLEVIKALRRSKHHNPSKGNGKENPSSSKNSQLADGLLQEICYPEKQYRKKKSSHMNFGKASSRSFSKISEEISMQSGNVANGVLHSASTSFFRGKEVLSNDMLKPALNISVNEIQFNFPIFCSDGSYIGSQARRKTLEQRDVTEKVHELRPFGRDCIHNQLHMIWEKGNGARNLTHQRGYGNVRIKADDNYSFARRVPRPLRSASTLTDNCGTMNQDILFHRYWGLRKNASSNWSSWNSKYQYNDQKECLEDVNLSSRGEKFPSFCSYFNSDHTELPSSSSSPTFIDEQMFQERNVMNDEVKNRKYDDSNMWKQNVVSLHSSVEFLVSDATAEVVDWTHSPTEHQSKSTAFVLSQEIDCLNHTSYTSKQQDRSDFNEGSVHSLCHEVHPDSLGSSVESCEPSPISVLDPLFGEDIQFGYKSDDHIYDSSEVDDEECGLNVSSDEDCENEYAHNSQGKKELAGLVRAEESRDFSYVVEVLTEASIFNRNLFTDFSTWHSSQCPISPSVFENLEKKFGQQQFWSRSERKLLFDCINIGLIQILEPCLFVPMWEKSTSRRLNVELNQNIIEDEMWGLLVVQEKKASNEYADHTLEGKIRWTELVEDVEDIVTEIVNLVTEELANEIVLSVNF 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10393g00004 699 MobiDBLite consensus disorder prediction 47 100 - -
Vium10393g00004 699 Pfam Domain of unknown function (DUF4378) 541 692 IPR025486 -
Vium10393g00004 699 MobiDBLite consensus disorder prediction 59 79 - -
Vium10393g00004 699 PANTHER AFADIN 5 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10393g00004 Vium-Chr10393 16165 21129 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10393g00004 430 694 TRM (TON1 Recruiting Motif) Superfamily AT2G39435 31.707 1.43e-30 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium10393g00004 - - vun:114185209 1125.15