Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1037g00014 ATGGCCTCATCATCATCTTCTTCTTCTTCATCTTCTTCTTCTCTAATGTTTACAGTGCGAAGATGCCAACCCCAGTTGGTAGTTCCTGCTATCCCCACTCCTCACGAAGTTAAGCCACTTTCCGACATTGATGATCAAGAAGCCCTGCGTTTTCACATTCCCTTCATACAAATTTATCGAAAGAAAGCATCCATGGCAGAGAAAGACCCAGTTCAAGTCATTCGCCAAGCACTCTCCCAGACACTTGTCTTCTATTACCCGTTTGCGGGTAGGCTTAGGGAGGGGCCTCACCGCAAATTGATGGTGAACTGCACCGGAGAAGGTGCCATGTTCGTTGAGGCCGATGCAGACGTCACACTCGAGCAGTTCGGCGATTCTCTCCAGCCTCCATTCCCATGCTTCCATGAACTTTTATACCATGTTCCTGCCTCACAACAAATTACCAACACTCCCCTTCTACTCGTACAGGTGACACGCCTTAGATGCGGTGGTTTCATCTTGGCCTTCTGCTTCAACCACATCATGTGTGACGGAGCTGGTCTTTCACAATTCATGAGCACGTGGGCTGAAATGGTTCGTGGTCCAACCGAACCTTCCATTCCACCTGTGTGGTGTAGGGAACTCCTGATGGCAAGACATCCACCTCGTATTACATGCAACCATCGCGAATTCGAACATGTCCCAGGCACAGTCAAAGGATCAAACCAACATGACATGGTCCTTCGATCGTTCTTCTTTGGACCTTCCCAAATAGCTACTATTCGTGGCTTGGTTCCACCCCACCTTCGGCACTGCACAACGTTTGATCTCATCACGGCATGCTTCTGGCGCTGTCGTACAAAAGCATTGCAGATAGAGGCAGACGAGGATGTTCGCATGATGGTGATAGTGAATGCACGTGCAAGGTTGAATCCTCCTTTACCAGTTGGCTACTACGGCAATGCTATTGCATACCCTGCAGCAGTTACGACTGCAGGGAAGCTTTGTGAAAATCCGTTTGGGTATGCTGTGAATTTGATAAATAAAGTGAAGGGTGAGGTGACAGAAGAGTACGTGCATTCTGTGGCGGATCTAATGGTGTCTAAGGGACGGTGCTCTTTCACAACGGTGAGATCTTTCATTGTGTCCGATCTGAGACGTTTTAGTTTCAGAGAAATTGATTTTGGTTGGGGTAAAGCATTGTACGGTGGAATAGCCAAAGCTGGAGCTGGAGCATTTCCTGCAGTAATATATCTGACATCGCATGAGAATGCAAATGGAGAAGAAGGTGTAGTGATACCAATTTGGTTGCCTGCCAAAGCCATGGAAAGGTTTGAACACGAGTTAAGTGACATGCTTCGAAACTAA 1347 0.4759 MASSSSSSSSSSSSLMFTVRRCQPQLVVPAIPTPHEVKPLSDIDDQEALRFHIPFIQIYRKKASMAEKDPVQVIRQALSQTLVFYYPFAGRLREGPHRKLMVNCTGEGAMFVEADADVTLEQFGDSLQPPFPCFHELLYHVPASQQITNTPLLLVQVTRLRCGGFILAFCFNHIMCDGAGLSQFMSTWAEMVRGPTEPSIPPVWCRELLMARHPPRITCNHREFEHVPGTVKGSNQHDMVLRSFFFGPSQIATIRGLVPPHLRHCTTFDLITACFWRCRTKALQIEADEDVRMMVIVNARARLNPPLPVGYYGNAIAYPAAVTTAGKLCENPFGYAVNLINKVKGEVTEEYVHSVADLMVSKGRCSFTTVRSFIVSDLRRFSFREIDFGWGKALYGGIAKAGAGAFPAVIYLTSHENANGEEGVVIPIWLPAKAMERFEHELSDMLRN 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1037g00014 448 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 25 440 - -
Vium1037g00014 448 SUPERFAMILY CoA-dependent acyltransferases 130 198 - -
Vium1037g00014 448 Coils Coil 435 448 - -
Vium1037g00014 448 Gene3D - 223 442 IPR023213 -
Vium1037g00014 448 Gene3D - 14 222 IPR023213 -
Vium1037g00014 448 Pfam Transferase family 22 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1037g00014 Vium-Chr1037 142793 144503 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1037g00014 50 442 Monolignol Biosynthesis Gene Families AT5G48930 28.431 1.07e-49 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1037g00014 K19861 - gmx:100792864 675.241