Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1037g00008 ATGGCCTCATCATCTTTTTCTCTAAAGTTTACAGTACGAAGGTGCGAACCCCAGCTGGTAGTTCCTGCTATCCCCACTCTTCATGAAGTTAAGCCACTTTCCGACATTGATGATCAAGAAGCCCTGCGTTTCCACCTTCCCTTCATACAAATTTATCCAAAGCAAGCATCAATGGCAGAGAAAGACCCAGTTCAACTCATTCGCCAAGCACTCTCCCAGACACTTGTCTTCTATTACCCATTTGCGGGTAGGCTTAGGGAGGGCCCTCACCGCAAATTGATGGTGGATTGCACCGGAGATGGTGCCATGTTCGTTGAGGCCGATGCTGACGTCACACTCGACAAGTTCGGCGATTCTCTCCAACCTCCATTCCCATGCTTCCATGAACTGCTATACCATGTTCCTGCCTCACAGCAAATTACCAACACTCCCCTTCTACTCGTACAGGTGACACGCCTTAGGTGCGGTGGTTTCATCTTGGCCTTCTGCTTCAACCACTTCATGTGTGACAGAGCTTCCATTTGTTTGCGATCTAAGTCAATTATCTAA 549 0.4827 MASSSFSLKFTVRRCEPQLVVPAIPTLHEVKPLSDIDDQEALRFHLPFIQIYPKQASMAEKDPVQLIRQALSQTLVFYYPFAGRLREGPHRKLMVDCTGDGAMFVEADADVTLDKFGDSLQPPFPCFHELLYHVPASQQITNTPLLLVQVTRLRCGGFILAFCFNHFMCDRASICLRSKSII 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1037g00008 182 Gene3D - 11 180 IPR023213 -
Vium1037g00008 182 PANTHER ACYL TRANSFERASE 4 10 172 - -
Vium1037g00008 182 Pfam Transferase family 14 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1037g00008 Vium-Chr1037 82581 83355 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1037g00008 43 170 Monolignol Biosynthesis Gene Families AT5G48930 37.500 9.02e-20 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1037g00008 K19861 - pvu:PHAVU_006G098400g 289.656