Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10364g00001 ATGAGTGCATACATTGGTGTGGTCTTTGTCGGTGTTGAAATTGGCTTAGTCATATCTGTAAGTTTCAGTTGCAATTTCTGTACTTCGGGGCTTTTCATTGCAAGGCCAAGGACATTGGTTTTGGGAAACATTCCAAATTTTAGGATTTACAGAAATGTTGAGCAATATCCAAATGCAAAACATGTTCCTGGAATCCTCATCCTAGACATTGATGCACCGGTTTACTTTGCCAATGCAAGCTATTTAAGAGAAAGGATCACAAGATGGGTTGATGAAGAAGAAAGCAGAATCAAAGCTACTGGAAAGACAAGTTTGCAGTATGTTATAATGGATATGAGTGGTGTTGGAAAAATTGATACAAGTGGAACAAGTATGCTTGAAGAGGTCCAGAAGATTACTCAGAGAAGAGAACTTCAACTTGTTTTGGTGAATCCGGGAAGCGAGGTGATGAAGAAACTGAACAAATCCAAGTTCCAAAATAATTTAGGAGAGAGATGGCTGTATTTAACTGTTAAAAAGGCCGTTGGAGCATGCAACTTCAATCTCCGTCAAAGGACGAATCTGAACAACGATGAATCAGAGGGTTGGAACTGTTAG 597 0.3936 MSAYIGVVFVGVEIGLVISVSFSCNFCTSGLFIARPRTLVLGNIPNFRIYRNVEQYPNAKHVPGILILDIDAPVYFANASYLRERITRWVDEEESRIKATGKTSLQYVIMDMSGVGKIDTSGTSMLEEVQKITQRRELQLVLVNPGSEVMKKLNKSKFQNNLGERWLYLTVKKAVGACNFNLRQRTNLNNDESEGWNC 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10364g00001 198 Gene3D STAS domain 35 181 IPR036513 -
Vium10364g00001 198 CDD STAS_SulP_like_sulfate_transporter 56 171 - -
Vium10364g00001 198 FunFam Sulfate transporter 31 35 181 - -
Vium10364g00001 198 PANTHER SULFATE TRANSPORTER 1 186 IPR001902 GO:0016020|GO:0055085
Vium10364g00001 198 SUPERFAMILY SpoIIaa-like 58 178 IPR036513 -
Vium10364g00001 198 Pfam STAS domain 56 174 IPR002645 -
Vium10364g00001 198 ProSiteProfiles STAS domain profile. 55 178 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10364g00001 Vium-Chr10364 1486 4146 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10364g00001 1 183 Inorganic Solute Cotransporters AT4G02700 56.284 3.22e-68 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium10364g00001 K17471 - vum:124819692 398.667