Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10361g00002 ATGGGATGTAATTCAGTACTCAGAAGCCCCAAGAAAGAAGAACAAGAGGTACCAGATGCTATCAATTCTTTATTACCAAATTCTAACCAATCTTACAGCTATGAAGATTTCAATATTTTGGACGAAATGGAAGGGGTCTTCAACTCCAAAGAGGAACAAAACTTACTGCAACAAGACTCTTCGAGTGGCGAATTCCATTGGGATTTCATGGAATGGGAGGAATTTGCTCGCATTGAAGAGGAAGGAGAAGACGAAAACGAAGGAAAAGAGCAGGTAACAGAGAGCATGAGGCAGTACCCTTTTGAGGAGAAGCAGATAAAGAGAGAAAACATTGTTGGGTTTTGGGAAATGGATGATGAGAAGATGATGGCTTTGAACTTGAACTTGAACTATCAAGAGGTTTTGGATGCATGGTCTAACCGAGGCTCTCTTTGGGCTGATGACTGTTCTCTTTCCTTGGAAACCAACAATGCTTACTATAATGGAGAAGTGCCAGTGTTGGAAGAAGAGAGAGCGAGAAGGGAAGCAAGTGTTCTTAGATACAAAGAGAAACGTCAGAACAGATTGTTCTCAAAGAAGATAAGATACCAAGTTCGGAAACTAAACGCTGATAAAAGACCAAGAATCAAGGGTCGCTTTGTGAAGAGACACTGA 654 0.4113 MGCNSVLRSPKKEEQEVPDAINSLLPNSNQSYSYEDFNILDEMEGVFNSKEEQNLLQQDSSSGEFHWDFMEWEEFARIEEEGEDENEGKEQVTESMRQYPFEEKQIKRENIVGFWEMDDEKMMALNLNLNYQEVLDAWSNRGSLWADDCSLSLETNNAYYNGEVPVLEEERARREASVLRYKEKRQNRLFSKKIRYQVRKLNADKRPRIKGRFVKRH 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10361g00002 217 Pfam CCT motif 174 216 IPR010402 GO:0005515
Vium10361g00002 217 MobiDBLite consensus disorder prediction 1 31 - -
Vium10361g00002 217 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 13 216 - -
Vium10361g00002 217 ProSiteProfiles CCT domain profile. 174 216 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10361g00002 Vium-Chr10361 39905 41128 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10361g00002 118 216 C2C2-CO-like Transcription Factor Family AT1G73870 46.610 4.92e-22 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vium10361g00002 CCT 2.1e-19 CL0281