Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10332g00007 ATGTCGTTCGGTGATTCCATAGCGAATTCACCTGAACTTCGAGCAGAAGGAGCTTCCAGAGAGAACTCCCACAACATGTCGCTCGGTGATTCCACAACGAATTCACCTGACCTTCAAGCGGAAGGAGCTTCAGAAGAGAACTCCTACAACAAGCCGCTTGCATTGAAAAGAGAAAAGATAATGATGTTGACAATGTTTTATTATGCTCTGGCTTTCACCATTTTTTCATTTTTTGCAGTGCTGAAATGGAACAGCTTAAGGTACTCAAGGAAAGGAATGCCTCCAGGGTCACTGGGATGGCCTTTGGTTGGGGAGACTATCAAATTTCTCACACAAGGACCAGATTTCATGAAAAGGAGCACATTAAGATATGGAAGTCTCTTCAAAACTCATGTATTGGGATCTCCTACTGTTATTAGCACGGATCCTGAAATCAACAGATACATACTCATGAATGAAGCAAAAGGCTTGGTTCCTGGCTACCCGGACTCCATGAGGAAGATCCTTGGGACTAACATTTCTGAGGTTCATGGTGCAGAACACAAACGAATAAGAGGCTCACTGTTATCTCTCGTTGGTCCAATCGCAGTTAAGGATCGTCTTTTGACAGAAGTTGATGACTTCATGAGCTCTTACCTAGACAATTGGGATGGTAAAATAGTTGATATACAAGAAAAAACTGTTGAGATGTCATTCTTTGTTTCCATGAAAGCTGTGGTGGAAGATGAGCCAAACTCTTTCATCGAGTACTTCAAAGCCTCGTTTGATAAAATGGCATTGGGAACAATATCCTTGCCATTTAAAATTCCAGGAACTCAATATTATCGAGGTTTGAAGGCTAGGGAAAAAGTGCTTGCAATGCTAAGAGAGCTGATAGCCAAGAGAAGAGCTTCTTCAGCCACTCATAACGACATTCTTGATCAACTTGTGAGAAATGAGGATGGTAAGTACAAGCTAAATGACGAAGAAATAATGGAGCAAATCACCACAATTTTATACTCAGGTTATGAAACGGTATCAACCACTACAATGATGTCTATCAAATACCTATGTGATAACCCTGACATTCTACAGGCAGTAAGGGATGAGCATTTTGCAATCTTGCAGAAGAAACTGCATGGAGAACGGATCAACTGGGATGACTACAAGAGCATGAGGCAAACTCGTGCGGTATTACTTGAGACAATGAGATTGGCTACTGTTGTTAATGGAGTGATGAGGAGGACTACTAAAGATATAGAATTGAATGGTTATATGATTCCCAAGGGATGGAGGGTTTATGTTTACACAAGGGATGGTAACTTTGATCCCATTCTCTATGAAGAACCTTTTACTTTTAATCCAAGGAGATGGCTGGAGAAAGGGTTGGAGACTCATAATCACAACATGCTATTTGGAGCAGGAGGTAGGGTTTGTCCTGGAAAGGAATGGGGCATGTTCAAAATCAGTATTTTTATTCACTATTTGGTGACTAGATACAGATGGGAAGAAGTTGAGGGAAGCAAAACACTTGCGAAATTTCCAAGGGTGATGGCACCAACAGGACTACACATGAAGATAAAAAAATACTAA 1572 0.4103 MSFGDSIANSPELRAEGASRENSHNMSLGDSTTNSPDLQAEGASEENSYNKPLALKREKIMMLTMFYYALAFTIFSFFAVLKWNSLRYSRKGMPPGSLGWPLVGETIKFLTQGPDFMKRSTLRYGSLFKTHVLGSPTVISTDPEINRYILMNEAKGLVPGYPDSMRKILGTNISEVHGAEHKRIRGSLLSLVGPIAVKDRLLTEVDDFMSSYLDNWDGKIVDIQEKTVEMSFFVSMKAVVEDEPNSFIEYFKASFDKMALGTISLPFKIPGTQYYRGLKAREKVLAMLRELIAKRRASSATHNDILDQLVRNEDGKYKLNDEEIMEQITTILYSGYETVSTTTMMSIKYLCDNPDILQAVRDEHFAILQKKLHGERINWDDYKSMRQTRAVLLETMRLATVVNGVMRRTTKDIELNGYMIPKGWRVYVYTRDGNFDPILYEEPFTFNPRRWLEKGLETHNHNMLFGAGGRVCPGKEWGMFKISIFIHYLVTRYRWEEVEGSKTLAKFPRVMAPTGLHMKIKKY 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10332g00007 523 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10332g00007 523 PRINTS P450 superfamily signature 463 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10332g00007 523 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10332g00007 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Vium10332g00007 523 MobiDBLite consensus disorder prediction 1 47 - -
Vium10332g00007 523 Gene3D Cytochrome P450 84 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10332g00007 523 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10332g00007 523 PRINTS E-class P450 group I signature 429 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10332g00007 523 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10332g00007 523 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10332g00007 523 PRINTS E-class P450 group I signature 389 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10332g00007 523 PRINTS E-class P450 group I signature 121 140 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10332g00007 523 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10332g00007 523 CDD CYP90-like 121 522 - -
Vium10332g00007 523 PANTHER CYTOCHROME P450 26 91 500 - -
Vium10332g00007 523 Pfam Cytochrome P450 94 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10332g00007 523 SUPERFAMILY Cytochrome P450 86 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium10332g00007 523 MobiDBLite consensus disorder prediction 20 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10332g00007 Vium-Chr10332 63774 70725 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10332g00007 142 523 Cytochrome P450 AT5G38970 53.385 2.61e-150 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium10332g00007 K09590 - gmx:100818004 786.178