Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1030g00001 ATGGCGAATGTGGCGATTCTTGAGCTCAGTAGAAACTGTGCCAAGACAGTGGAAGAAATAGTAAAATTAGAAAGAAAGATCTTTCCAAAACACGAATCACTAGCTTCATTCTTTCACGATGAACTGCAAAAGAAGAACAGTGGATTGCTTTATCTTCACGTGGATGGCGAGCTTGCAGGCTACGTCATGTATTCTTGGCCTTCTTCCCTGTACGCCTCCATCACCAAGCTCGCAGTGAAGGAGCAATATAGGGGACAAGGCCACGGAGAGACTCTGTTGAAAGCAGCAGTTGAGAAATGCAGGACAAGAAAAGTTTCGCGCATAATGCTTCATGTGGATCCCTTGAGGACTCCTGCAGTGAATCTTTACAAGAAATATGGTTTCCTAGTTGACACTTTGATTCAAGGCTACTACTCCTCAGACAGAAATGCTTATAGAATGTACCTGGACTTTGATTCAAGTTAA 465 0.4323 MANVAILELSRNCAKTVEEIVKLERKIFPKHESLASFFHDELQKKNSGLLYLHVDGELAGYVMYSWPSSLYASITKLAVKEQYRGQGHGETLLKAAVEKCRTRKVSRIMLHVDPLRTPAVNLYKKYGFLVDTLIQGYYSSDRNAYRMYLDFDSS 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1030g00001 154 Gene3D - 8 150 - -
Vium1030g00001 154 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 153 - -
Vium1030g00001 154 Pfam Acetyltransferase (GNAT) family 19 128 IPR000182 GO:0016747
Vium1030g00001 154 CDD NAT_SF 55 111 - -
Vium1030g00001 154 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 4 152 IPR000182 GO:0016747
Vium1030g00001 154 Coils Coil 6 26 - -
Vium1030g00001 154 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 16 151 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1030g00001 Vium-Chr1030 515 2011 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vium1030g00001 Acetyltransf_1 2e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1030g00001 - - gmx:100808090 280.026