Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10273g00013 ATGAATAGAGGAACAATTATTGTAGATGCTATCACCTACATTGAGAAGCTTCAAGATGAAGTTCAGAGTCTCAGCCAACAACTTCACCAAATGGAAGCAACTTCAGAGGAAACAACTGAGACAAAAATAGATGAAATTGAAGCTGTGGAAGATATGAAGAATTGGGGAATACAGGAAGAGGTCACTGTGGCACAAATAGATGAGAATAAGTTCTGGGTCAAGATCATCATTGAGAAAAAGAGAGGAAGCTTCAGCAAGCTGATGGAGACACTCAATTACTTCGGCATTGAGCTCATGGACACTAACCTGACTACCACAAAAGGAGCATTTCTGATTACAAGCTGCATACAGGGAAAAAATGGAGAAAGACTTGAAATTAATCAAATCAAGGATTTGTTGCAAGATATTATCAATGACATGTAG 423 0.383 MNRGTIIVDAITYIEKLQDEVQSLSQQLHQMEATSEETTETKIDEIEAVEDMKNWGIQEEVTVAQIDENKFWVKIIIEKKRGSFSKLMETLNYFGIELMDTNLTTTKGAFLITSCIQGKNGERLEINQIKDLLQDIINDM 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10273g00013 140 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 134 - -
Vium10273g00013 140 Coils Coil 7 41 - -
Vium10273g00013 140 Gene3D - 1 54 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10273g00013 Vium-Chr10273 51427 52261 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10273g00013 1 137 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 40.000 2.86e-30 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium10273g00013 - - vun:114186874 259.61