Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vium1026g00025 | ATGTCAGAAATGCGGGTGTCCGAGCTTCACTTGAAAAAGGAACTCACCCAAATACGCAAGGCTGCTCGAGTTCTCAGAGATCCTGGCACCACATCTTCGTGGAAGTCACCGCTCAGTTCATCAAGATCCGTGGCTGCATGGAACAGAGACAGTGGAAGTAGAAGGTTCAGCACCAACTCTCAACTTGCCAACAATGACAAAGAGAAAGAGAAGGAGAGGGAGAAAAAGGTGTTCTTGTACAATTGGAAGAACTACAAATCTTCGAGTGAGAAATACAACGAGGAAGAAGATGACGATGATGGTGATGATGGGGGGTCTTCGTCGCTTCTTGGGGACAGAGACAGAGACAGTTTGAGTGATGCTCGCAATGGTTGCGACTCTAAGAGTGATACATTCCTGGCTGCTGGTGGTACCGGTGGCGATGGTGGGACTCGTTCTTCTATTTTCAGATGTGGGGATGCTAATCTTGTTTCGAGAAGAACTGTCCCCGTTAAGAAAAAGAGTAAGAAAAATAACCCTCATTTTGATTTTTTAGCAAAATATCAACAGCATAGACAAACGAATCCAGGGAGAAATTTTGTGAGTTCTTCGAAGGCAATGCTCGAGGGCCATTCTTCTTTGCCATTTTTTAGCAGAGATGACTCTGTTGAGTTCTCTGATGATACCGAGGATTACACTAATTCTGAGGGCGTGAGACCCATTTCGGGGACTTCCCCTTTGCTTCTCAAACTCAGGCAAAAGAACTGGTCTCGCTCTTCCTCGAAGTTTTTGAGAAGAAGTCGAAAAGAGGACTCTTCTTATTCTTACAGCACCCCTGCATTGTCAACTAGTTCTTACAATCGGTACGGTCACCGTTATCCCAGCACCCTTGGATCCTGGGATGGCACCACCACTTCCGTGAATGATGGCGATGGAGATGATGAGATTGATGATCATTTGGATTTGCCTGGCCGCCAAGGATGTGGAATTCCTTGCTATTGGTCCAAGAGGACTCCTAAACATAAAGGGATGTGTGGGAGTTGCTATTCTCCCTCACTGTCCGACACTTTAAGGAGGAAAGGGAGTAGCATGCTCTGTGGAAGTCAAAATATTTATCCCAGACACCGCAGATCGGTTTCGGCATCTCAAAAGAGAAGACTTTCTCAGAGGAGTGCTCGAGGTGTCATTCCATTACTCACAAACAGTGGTGATGCCAGAGAAGGGTCGTCTGTGGGAACCGGAAGGAGTGATGATGAACTTTCCACGAACTTTGGGGAGCTTGATCTTGAGGGATTGAGCCGCTTGGATGGAAGAAGGTGGTCATCTAGTTGTAGGAGTCAAGAGGGATTGGAGATTGTAGCTCTCAATGGGGAAGGGGAAGAGGAGGGCACGCCGGAGAATAGTCGCTGTTTCAGCCAAAAGTATAGGCCGATGTTCTTTGGCGAACTGATTGGGCAGAATATTGTTGTTCAGTCACTTATCAATGCTGTTTCCAGGGGACGCATTGCTCCTGTCTATCTGTTTCAAGGTCCCCGTGGAACTGGCAAAACGTCAACCGCTAAGATATTTGCTGCTGCCTTGAACTGTGCAAGTCCTGATGAGAATAAACCTTGTGGCTACTGCAGGGAATGCACTAATCTCATTTCTGGTAAGAGCAGTGATCTTTTGGAAGTTGATGGAACCAATAAGAGAGGAATTGATAAGGCTAGATATCTCCTGAAAAGATTGTCAACTGAGTCATCGTCAGCCTCACCACAATATACAGTTTTGGTTATTGATGAGTGTCACTTGTTGCCCTCAAAGACGTGGCTGGGATTTCTCAAGTTCCTGGAAGAACCACCCCAGCGAGTTGTATTCATATTTATAACATCTGATCTTGACAATGTACCACGGACAATACAATCTCGTTGCCAAAAGTACCTTTTTAATAAAATTAAAGATGTGGATATGGTGACCAGGTTGAGGAAAATATCTACTCAGGAGAACCTTGATGTTGAAGCAGATGCACTGGACCTCATTGCTACGAATGCAGATGGATCGCTTCGAGATGCAGAAACAATGTTAGAACAGCTTAGTTTGCTGGGGAAGAGAATTACTACTTCTCTTGTCAATGAACTTGTGGGAGTTGTTTCAGATGAAAAATTGTTGGAACTTTTGGAGTTGGCAATGTCATCAGATACTGTAGAGACAGTGAAAAGAGCTAGAGAATTGATGGACTCTGGAGTTGATCCAATGGTTTTGATGTCTCAACTTGCTGGCCTTATCATGGACATCATTGCTGGGTCATATGCAGTCGTTGACACCAGACCTGATGATTCATTCTTTGGTGGACGGAGTTTGAATGAATCAGAGTTGGAGAGGTTAAAAAATGCTTTGAAGCTTCTCTCTGAGGCCGAGAAACAGTTAAGAACATCCAGTGAACGTTGTACATGGTTCACAGCAACTCTTTTGCAGCTTGGTTCTACACCTTCTCCTGATCTCACGCAGTCAAGCAGCAGTAGAAGGCAGAGCTGCAAGACAACTGAAGATGATCCATCAAGTGTTTCACGAGATGTTACCTCTGGCACGCACAAGTCAGACCCTCAGTATGTGCCTCGAAAGTCACCTTTCTCTGGATCCCAGCAAAAGGCAGTAGATGATGATTCCAAACATCAAAAGGAATCAAAGATTGAAGGTTTCAGCTTGAAATCGAAGCCGTCAAACAGCCCAGTATTAGATGATGGCTCTACAGTTGTATCATCTGATGATCTTATGGTGGGGAATACAATGTATAGGTGCATAGATTCAGGGAAGTTATCTGACATCTGGGTGCATTGTATTGAGAAGTGCCACTCTAAGACATTGAGGCAGCTGCTGCACCATCATGGAAAGCTTGTGTCCATATGTGAAGTAGAAGATGTTTTGGTAGCATATATTGCTTTTGGTGACGCGGATATTAAAGTTCGGGCTGAGAGGTTTTTAAGAAGCATCACAAACTCCATGGAAATGGTTCTTAGGCGCAATGTGGAGGTCCGAATAATCCACTTGGCAGGTGGAGAAGGTGAAAACAAGGTTAATCTAACAGGTGTAAAGCAGGGTGAGTCAATAGTGGCTAGTGAGAAGGAACAAAGACAGGGTCATGTGAATGGAACGGAGTCTTATTCTAGTTTGCCTCCTTTACTTGATAGAAACCTTCAATCTAGGACTGCTTCATCAGATATCTTGGGTGAAGGTAATGGTGGGAGGGAGAGGAGACAAGATAATCCAATGCATAGAATTGAATCCATCATTCGTGAGCAGAGGCTGGAAAGTGCCTGGTTACAGGCCGTAGAGAAAGGTTCCCCGGGATCATTAAATCGTTTGAGACCCGAAAAGAATCAAGTACTGCCACAGAATGGTGTAGACCCGATGGAGTCCATGGAGTCAACAAGATTTTCCTCTCACCAGCATTGGGAAGACGAACCCAATAATGAACTCAAAGTTTTGACCCTTAAAAATGGAAGGGTCCCTCAGAAGGACCAGACTGGTAGAAAGGCAGATCGCTATCCCATGTCCCCAAGTTTATTGCATGACACCAGCTTAGCCACAATTTCTGGAAAAGACCATCCGGGATATGAATCGGGGTCAGGAGCTGGTGGTTGTGGGTTTTTATGTTGGAATAAGTCGAAGCCGAGAAGGGTAATAAAGGTGAAAGGTGGCACCCCAGTTAGAGCGCGCAGAGGGGCAAGTTTTGCGTTGTTCGGTGACTGTGGTAAGACAAAGAAAAGGGAGCGGAAAAGATAA | 3741 | 0.4515 | MSEMRVSELHLKKELTQIRKAARVLRDPGTTSSWKSPLSSSRSVAAWNRDSGSRRFSTNSQLANNDKEKEKEREKKVFLYNWKNYKSSSEKYNEEEDDDDGDDGGSSSLLGDRDRDSLSDARNGCDSKSDTFLAAGGTGGDGGTRSSIFRCGDANLVSRRTVPVKKKSKKNNPHFDFLAKYQQHRQTNPGRNFVSSSKAMLEGHSSLPFFSRDDSVEFSDDTEDYTNSEGVRPISGTSPLLLKLRQKNWSRSSSKFLRRSRKEDSSYSYSTPALSTSSYNRYGHRYPSTLGSWDGTTTSVNDGDGDDEIDDHLDLPGRQGCGIPCYWSKRTPKHKGMCGSCYSPSLSDTLRRKGSSMLCGSQNIYPRHRRSVSASQKRRLSQRSARGVIPLLTNSGDAREGSSVGTGRSDDELSTNFGELDLEGLSRLDGRRWSSSCRSQEGLEIVALNGEGEEEGTPENSRCFSQKYRPMFFGELIGQNIVVQSLINAVSRGRIAPVYLFQGPRGTGKTSTAKIFAAALNCASPDENKPCGYCRECTNLISGKSSDLLEVDGTNKRGIDKARYLLKRLSTESSSASPQYTVLVIDECHLLPSKTWLGFLKFLEEPPQRVVFIFITSDLDNVPRTIQSRCQKYLFNKIKDVDMVTRLRKISTQENLDVEADALDLIATNADGSLRDAETMLEQLSLLGKRITTSLVNELVGVVSDEKLLELLELAMSSDTVETVKRARELMDSGVDPMVLMSQLAGLIMDIIAGSYAVVDTRPDDSFFGGRSLNESELERLKNALKLLSEAEKQLRTSSERCTWFTATLLQLGSTPSPDLTQSSSSRRQSCKTTEDDPSSVSRDVTSGTHKSDPQYVPRKSPFSGSQQKAVDDDSKHQKESKIEGFSLKSKPSNSPVLDDGSTVVSSDDLMVGNTMYRCIDSGKLSDIWVHCIEKCHSKTLRQLLHHHGKLVSICEVEDVLVAYIAFGDADIKVRAERFLRSITNSMEMVLRRNVEVRIIHLAGGEGENKVNLTGVKQGESIVASEKEQRQGHVNGTESYSSLPPLLDRNLQSRTASSDILGEGNGGRERRQDNPMHRIESIIREQRLESAWLQAVEKGSPGSLNRLRPEKNQVLPQNGVDPMESMESTRFSSHQHWEDEPNNELKVLTLKNGRVPQKDQTGRKADRYPMSPSLLHDTSLATISGKDHPGYESGSGAGGCGFLCWNKSKPRRVIKVKGGTPVRARRGASFALFGDCGKTKKRERKR | 1246 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vium1026g00025 | 1246 | MobiDBLite | consensus disorder prediction | 25 | 73 | - | - | |
| Vium1026g00025 | 1246 | MobiDBLite | consensus disorder prediction | 106 | 123 | - | - | |
| Vium1026g00025 | 1246 | MobiDBLite | consensus disorder prediction | 396 | 413 | - | - | |
| Vium1026g00025 | 1246 | MobiDBLite | consensus disorder prediction | 870 | 886 | - | - | |
| Vium1026g00025 | 1246 | FunFam | DNA polymerase III subunit gamma/tau | 639 | 701 | - | - | |
| Vium1026g00025 | 1246 | MobiDBLite | consensus disorder prediction | 887 | 902 | - | - | |
| Vium1026g00025 | 1246 | Pfam | DNA polymerase III subunits gamma and tau domain III | 692 | 811 | IPR022754 | GO:0003887 | |
| Vium1026g00025 | 1246 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 487 | 685 | IPR027417 | - | |
| Vium1026g00025 | 1246 | Gene3D | - | 641 | 701 | - | - | |
| Vium1026g00025 | 1246 | Coils | Coil | 771 | 801 | - | - |
Showing 1 to 10 of 27 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vium1026g00025 | - | - | gmx:100814391 | 2065.81 |
Showing 1 to 1 of 1 entries