Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1026g00012 ATGGAGGCCACTGAGAATAAGCTGAAGCTGTATTCACACTGGATAAGCTCCTGTTCCTTCCGAGTCCGATTTGCTCTCAACCTCAAAGGACTACCTTACGATTATCAAATAGTCACCACATTTTCTGATCCCGAGTTTCTCAAGCTCAACCCTATTGGATTTGTCCCTGTGCTGGTGGATGGCGATTCAGTAATTGCTGACTCTTTTGCCATTATTATGTACTTGGAGGATAAGTATCCTCACCCTCCTTTGCTTCCTCATGACATTCTCAAAAGAGCAATCAATTTCCAGGCTGTCACCATTGTTTCCTCATCTATACAACCTTTTCAAAACTATACTGTTGTGAAGTATATAGGGGAAAAAATCGGCCCTGATGAAAAACTTCCTTGGACCCAACGTGTAATAGGAAAAGGCTTTACGGCACTTGAAAAACTGTTGAAAAACCATGCAGGAAGATATGCAACTGGAGATCAAATTTTCCTGGCAGATATGTTTTTAGCACCTCAGTTAGATGCAGCAATTAGGAGATTCAACGTTGACATGAAGGAATTCCCTACTCTATCAAGATTACATGAGGCATATAATGAAATCCCAGCATTTCGGGAGGCTTTGCCAGAGAACCAACCAGATGCAGTTCATTAG 642 0.4174 MEATENKLKLYSHWISSCSFRVRFALNLKGLPYDYQIVTTFSDPEFLKLNPIGFVPVLVDGDSVIADSFAIIMYLEDKYPHPPLLPHDILKRAINFQAVTIVSSSIQPFQNYTVVKYIGEKIGPDEKLPWTQRVIGKGFTALEKLLKNHAGRYATGDQIFLADMFLAPQLDAAIRRFNVDMKEFPTLSRLHEAYNEIPAFREALPENQPDAVH 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1026g00012 213 Gene3D - 87 213 - -
Vium1026g00012 213 FunFam Zeta class glutathione transferase GSTZ1 6 85 - -
Vium1026g00012 213 NCBIfam maleylacetoacetate isomerase 9 211 IPR005955 GO:0003824|GO:0005737|GO:0009072
Vium1026g00012 213 SFLD Glutathione Transferase (cytosolic) 8 194 IPR040079 -
Vium1026g00012 213 SUPERFAMILY GST C-terminal domain-like 83 211 IPR036282 -
Vium1026g00012 213 Gene3D Glutaredoxin 5 86 - -
Vium1026g00012 213 PANTHER MALEYLACETOACETATE ISOMERASE 8 211 - -
Vium1026g00012 213 FunFam Maleylacetoacetate isomerase 87 213 - -
Vium1026g00012 213 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 83 IPR004045 -
Vium1026g00012 213 Pfam Glutathione S-transferase, N-terminal domain 10 83 IPR004045 -
Vium1026g00012 213 SFLD Main (cytGST) 8 194 - -
Vium1026g00012 213 SUPERFAMILY Thioredoxin-like 6 86 IPR036249 -
Vium1026g00012 213 Pfam Glutathione S-transferase, C-terminal domain 128 201 IPR004046 -
Vium1026g00012 213 CDD GST_C_Zeta 91 208 IPR034330 -
Vium1026g00012 213 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 213 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1026g00012 Vium-Chr1026 24477 28682 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1026g00012 5 210 Glutathione S-transferase Gene Family AT2G02380 60.000 3.67e-90 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1026g00012 K01800 - gmx:100526991 362.844