Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1026g00010 ATGTTTGATGAGGAGGCCACTGAGAATAAGCTGAAGCTGTATTCACACTGGATAAGCTCCTGTTCCTTCCGAGTCCGATTTGCTCTCAACCTCAAAGGACTACCTTACGATTATCAAATAGTCACCACATTTTCTGATCCCGAGTTTCTCAAGCTCAACCCTATTGGATTTGTCCCTGTGCTGGTGGATGGCGATTCAGTAATTGCTGACTCTTTTGCCATTATTATGTACTTGGAGGATAAGTATCCTCACCCTCCTTTGCTTCCTCATGACATTCTCAAAAGAGCAATCAATTTCCAGGCTGTCACCATTGTTTCCTCATCTATACAACCTTTTCAAAACTATACTGTTGTGAAGTATATAGGGGAAAAAATCGGCCCTGATGAAAAACTTCCTTGGACCCAACGTGTAATAGGAAAAGGCTTTACGGCACTTGAAAAACTGTTGAAAAACCATGCAGGAAGATATGCAACTGGAGATCAAATTTTCCTGGCAGATATGTTTTTAGCACCTCAGTTAGATGCAGCAATTAGGAGATTCAACGTTGACATGAAGGAATTCCCTACTCTATCAAGATTACATGAGGCATATAATGAAATCCCAGCATTTCGGGAGGCTTTGCCAGAGAACCAACCAGATGCAGTTCATTAG 651 0.4163 MFDEEATENKLKLYSHWISSCSFRVRFALNLKGLPYDYQIVTTFSDPEFLKLNPIGFVPVLVDGDSVIADSFAIIMYLEDKYPHPPLLPHDILKRAINFQAVTIVSSSIQPFQNYTVVKYIGEKIGPDEKLPWTQRVIGKGFTALEKLLKNHAGRYATGDQIFLADMFLAPQLDAAIRRFNVDMKEFPTLSRLHEAYNEIPAFREALPENQPDAVH 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1026g00010 216 FunFam Zeta class glutathione transferase GSTZ1 9 88 - -
Vium1026g00010 216 SFLD Glutathione Transferase (cytosolic) 11 197 IPR040079 -
Vium1026g00010 216 Gene3D - 90 216 - -
Vium1026g00010 216 PANTHER MALEYLACETOACETATE ISOMERASE 11 214 - -
Vium1026g00010 216 SUPERFAMILY Thioredoxin-like 9 89 IPR036249 -
Vium1026g00010 216 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 216 IPR010987 -
Vium1026g00010 216 SUPERFAMILY GST C-terminal domain-like 86 214 IPR036282 -
Vium1026g00010 216 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 9 86 IPR004045 -
Vium1026g00010 216 CDD GST_C_Zeta 94 211 IPR034330 -
Vium1026g00010 216 FunFam Maleylacetoacetate isomerase 90 216 - -
Vium1026g00010 216 Pfam Glutathione S-transferase, N-terminal domain 13 86 IPR004045 -
Vium1026g00010 216 Pfam Glutathione S-transferase, C-terminal domain 131 204 IPR004046 -
Vium1026g00010 216 SFLD Main (cytGST) 11 197 - -
Vium1026g00010 216 NCBIfam maleylacetoacetate isomerase 12 214 IPR005955 GO:0003824|GO:0005737|GO:0009072
Vium1026g00010 216 Gene3D Glutaredoxin 8 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1026g00010 Vium-Chr1026 24475 28955 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1026g00010 8 213 Glutathione S-transferase Gene Family AT2G02380 60.000 4.30e-90 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1026g00010 K01800 - gmx:100526991 362.844