Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1026g00009 ATGGCCACTGAGAATAAGCTGAAGCTGTATTCACACTGGATAAGCTCCTGTTCCTTCCGAGTCCGATTTGCTCTCAACCTCAAAGAGTTTCTCAAGCTCAACCCTATTGGATTTGTCCCTGTGCTGGTGGATGGCGATTCAGTAATTGCTGACTCTTTTGCCATTATTATGTACTTGGAGGATAAGTATCCTCACCCTCCTTTGCTTCCTCATGACATTCTCAAAAGAGCAATCAATTTCCAGGCTGTCACCATTGTTTCCTCATCTATACAACCTTTTCAAAACTATACTGTTGTGAAGTATATAGGGGAAAAAATCGGCCCTGATGAAAAACTTCCTTGGACCCAACGTGTAATAGGAAAAGGCTTTACGGCACTTGAAAAACTGTTGAAAAACCATGCAGGAAGATATGCAACTGGAGATCAAATTTTCCTGGCAGATATGTTTTTAGCACCTCAGTTAGATGCAGCAATTAGGAGATTCAACGTTGACATGAAGGAATTCCCTACTCTATCAAGATTACATGAGGCATATAATGAAATCCCAGCATTTCGGGAGGCTTTGCCAGAGAACCAACCAGATGCAGTTCATTAG 594 0.4175 MATENKLKLYSHWISSCSFRVRFALNLKEFLKLNPIGFVPVLVDGDSVIADSFAIIMYLEDKYPHPPLLPHDILKRAINFQAVTIVSSSIQPFQNYTVVKYIGEKIGPDEKLPWTQRVIGKGFTALEKLLKNHAGRYATGDQIFLADMFLAPQLDAAIRRFNVDMKEFPTLSRLHEAYNEIPAFREALPENQPDAVH 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1026g00009 197 FunFam Maleylacetoacetate isomerase 71 197 - -
Vium1026g00009 197 SUPERFAMILY GST C-terminal domain-like 67 195 IPR036282 -
Vium1026g00009 197 SFLD Glutathione Transferase (cytosolic) 28 178 IPR040079 -
Vium1026g00009 197 Gene3D Glutaredoxin 1 70 - -
Vium1026g00009 197 SUPERFAMILY Thioredoxin-like 5 70 IPR036249 -
Vium1026g00009 197 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 67 IPR004045 -
Vium1026g00009 197 Pfam Glutathione S-transferase, N-terminal domain 28 67 IPR004045 -
Vium1026g00009 197 CDD GST_C_Zeta 75 192 IPR034330 -
Vium1026g00009 197 PANTHER MALEYLACETOACETATE ISOMERASE 7 195 - -
Vium1026g00009 197 Pfam Glutathione S-transferase, C-terminal domain 112 185 IPR004046 -
Vium1026g00009 197 NCBIfam maleylacetoacetate isomerase 29 195 IPR005955 GO:0003824|GO:0005737|GO:0009072
Vium1026g00009 197 Gene3D - 71 197 - -
Vium1026g00009 197 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 72 197 IPR010987 -
Vium1026g00009 197 SFLD Main (cytGST) 28 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1026g00009 Vium-Chr1026 24474 28682 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1026g00009 4 195 Glutathione S-transferase Gene Family AT2G02380 56.398 6.29e-84 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1026g00009 K01800 - gmx:100526991 327.02