Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1026g00008 ATGGAGGCCACTGAGAATAAGCTGAAGCTGTATTCACACTGGATAAGCTCCTGTTCCTTCCGAGTCCGATTTGCTCTCAACCTCAAAGAGTTTCTCAAGCTCAACCCTATTGGATTTGTCCCTGTGCTGGTGGATGGCGATTCAGTAATTGCTGACTCTTTTGCCATTATTATGTACTTGGAGGATAAGTATCCTCACCCTCCTTTGCTTCCTCATGACATTCTCAAAAGAGCAATCAATTTCCAGGCTGTCACCATTGTTTCCTCATCTATACAACCTTTTCAAAACTATACTGTTGTGAAGTATATAGGGGAAAAAATCGGCCCTGATGAAAAACTTCCTTGGACCCAACGTGTAATAGGAAAAGGCTTTACGGCACTTGAAAAACTGTTGAAAAACCATGCAGGAAGATATGCAACTGGAGATCAAATTTTCCTGGCAGATATGTTTTTAGCACCTCAGTTAGATGCAGCAATTAGGAGATTCAACGTTGACATGAAGGAATTCCCTACTCTATCAAGATTACATGAGGCATATAATGAAATCCCAGCATTTCGGGAGGCTTTGCCAGAGAACCAACCAGATGCAGTTCATTAG 597 0.4188 MEATENKLKLYSHWISSCSFRVRFALNLKEFLKLNPIGFVPVLVDGDSVIADSFAIIMYLEDKYPHPPLLPHDILKRAINFQAVTIVSSSIQPFQNYTVVKYIGEKIGPDEKLPWTQRVIGKGFTALEKLLKNHAGRYATGDQIFLADMFLAPQLDAAIRRFNVDMKEFPTLSRLHEAYNEIPAFREALPENQPDAVH 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1026g00008 198 CDD GST_C_Zeta 76 193 IPR034330 -
Vium1026g00008 198 SFLD Glutathione Transferase (cytosolic) 29 179 IPR040079 -
Vium1026g00008 198 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 68 IPR004045 -
Vium1026g00008 198 Gene3D - 71 198 - -
Vium1026g00008 198 NCBIfam maleylacetoacetate isomerase 30 196 IPR005955 GO:0003824|GO:0005737|GO:0009072
Vium1026g00008 198 SUPERFAMILY Thioredoxin-like 6 71 IPR036249 -
Vium1026g00008 198 Pfam Glutathione S-transferase, N-terminal domain 29 68 IPR004045 -
Vium1026g00008 198 Gene3D Glutaredoxin 6 70 - -
Vium1026g00008 198 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 73 198 IPR010987 -
Vium1026g00008 198 SUPERFAMILY GST C-terminal domain-like 68 196 IPR036282 -
Vium1026g00008 198 SFLD Main (cytGST) 29 179 - -
Vium1026g00008 198 FunFam Maleylacetoacetate isomerase 72 198 - -
Vium1026g00008 198 Pfam Glutathione S-transferase, C-terminal domain 113 186 IPR004046 -
Vium1026g00008 198 PANTHER MALEYLACETOACETATE ISOMERASE 8 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1026g00008 Vium-Chr1026 24471 28682 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1026g00008 5 196 Glutathione S-transferase Gene Family AT2G02380 56.398 6.12e-84 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1026g00008 K01800 - gmx:100526991 327.02