Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1026g00007 ATGTTTGATGAGGAGGCCACTGAGAATAAGCTGAAGCTGTATTCACACTGGATAAGCTCCTGTTCCTTCCGAGTCCGATTTGCTCTCAACCTCAAAGAGTTTCTCAAGCTCAACCCTATTGGATTTGTCCCTGTGCTGGTGGATGGCGATTCAGTAATTGCTGACTCTTTTGCCATTATTATGTACTTGGAGGATAAGTATCCTCACCCTCCTTTGCTTCCTCATGACATTCTCAAAAGAGCAATCAATTTCCAGGCTGTCACCATTGTTTCCTCATCTATACAACCTTTTCAAAACTATACTGTTGTGAAGTATATAGGGGAAAAAATCGGCCCTGATGAAAAACTTCCTTGGACCCAACGTGTAATAGGAAAAGGCTTTACGGCACTTGAAAAACTGTTGAAAAACCATGCAGGAAGATATGCAACTGGAGATCAAATTTTCCTGGCAGATATGTTTTTAGCACCTCAGTTAGATGCAGCAATTAGGAGATTCAACGTTGACATGAAGGAATTCCCTACTCTATCAAGATTACATGAGGCATATAATGAAATCCCAGCATTTCGGGAGGCTTTGCCAGAGAACCAACCAGATGCAGTTCATTAG 606 0.4175 MFDEEATENKLKLYSHWISSCSFRVRFALNLKEFLKLNPIGFVPVLVDGDSVIADSFAIIMYLEDKYPHPPLLPHDILKRAINFQAVTIVSSSIQPFQNYTVVKYIGEKIGPDEKLPWTQRVIGKGFTALEKLLKNHAGRYATGDQIFLADMFLAPQLDAAIRRFNVDMKEFPTLSRLHEAYNEIPAFREALPENQPDAVH 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1026g00007 201 SFLD Glutathione Transferase (cytosolic) 32 182 IPR040079 -
Vium1026g00007 201 Pfam Glutathione S-transferase, C-terminal domain 116 189 IPR004046 -
Vium1026g00007 201 NCBIfam maleylacetoacetate isomerase 33 199 IPR005955 GO:0003824|GO:0005737|GO:0009072
Vium1026g00007 201 SFLD Main (cytGST) 32 182 - -
Vium1026g00007 201 Gene3D - 74 201 - -
Vium1026g00007 201 FunFam Maleylacetoacetate isomerase 75 201 - -
Vium1026g00007 201 SUPERFAMILY Thioredoxin-like 9 74 IPR036249 -
Vium1026g00007 201 PANTHER MALEYLACETOACETATE ISOMERASE 32 199 - -
Vium1026g00007 201 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 76 201 IPR010987 -
Vium1026g00007 201 CDD GST_C_Zeta 79 196 IPR034330 -
Vium1026g00007 201 SUPERFAMILY GST C-terminal domain-like 71 199 IPR036282 -
Vium1026g00007 201 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 9 71 IPR004045 -
Vium1026g00007 201 Pfam Glutathione S-transferase, N-terminal domain 32 71 IPR004045 -
Vium1026g00007 201 Gene3D Glutaredoxin 9 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1026g00007 Vium-Chr1026 24470 28682 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1026g00007 8 199 Glutathione S-transferase Gene Family AT2G02380 56.398 7.50e-84 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1026g00007 K01800 - gmx:100526991 327.02