Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1026g00006 ATGGCAAGCGCAAGTGTTGCTAAAGAAGAAGATAACAAACTCACGCTCTATTCGTATTGGAGGAGCTCTTGTTCCTTCCGAGTCCGAATCGCTCTCAACCTCAAAGGCCTTAAATACGACTACAAGCCCGTCAATCTGTTGAAAGGAGAACAATATAGCCCCGAGTTTCTCCAGCTCAACCCTGTTGGTTGTGTTCCCGTTCTAGTGGATGGCCACGCTGTTCTTTATGATTCTCTCGCCATTATTTTGTATTTGGAAGATAAGTATCCTCACAATCCTCTGCTCCCTCGTGATATTCCTAAGAGAACAATCAATTTCCAGGCTACTAGTGTTGTTTCCTCAACAATACAACCTCTTCATAACTTGAGTTTACTGAACTACGTTGGGGAGAAAGTTGGTCCTGATGAAAAACTTCGTTGGGCACAAAGTGTAATTAGAAGAGGCTTTACAGCACTTGAAAAGCTATTGAAAGACCACACAGGAAGATATGCAACCGGGGATGAAATTTTCCTGGCAGACGTATTTTTAGCACCTCAGTTACATACAGCATTCAAAAGATTCAATATCCCAATGAACGAGTTCCCTGTTCTGTCAAGATTGCATGAGACATATTCTACGATCCCCGCATTCCAGGAGGCTCTACCAGAGAACCAGCCAGATGCAGTACACTAG 672 0.4345 MASASVAKEEDNKLTLYSYWRSSCSFRVRIALNLKGLKYDYKPVNLLKGEQYSPEFLQLNPVGCVPVLVDGHAVLYDSLAIILYLEDKYPHNPLLPRDIPKRTINFQATSVVSSTIQPLHNLSLLNYVGEKVGPDEKLRWAQSVIRRGFTALEKLLKDHTGRYATGDEIFLADVFLAPQLHTAFKRFNIPMNEFPVLSRLHETYSTIPAFQEALPENQPDAVH 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1026g00006 223 SUPERFAMILY GST C-terminal domain-like 93 221 IPR036282 -
Vium1026g00006 223 SUPERFAMILY Thioredoxin-like 10 97 IPR036249 -
Vium1026g00006 223 CDD GST_N_Zeta 14 86 IPR034333 -
Vium1026g00006 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 12 93 IPR004045 -
Vium1026g00006 223 FunFam Glutathione S-transferase Z1 12 96 - -
Vium1026g00006 223 FunFam Maleylacetoacetate isomerase 97 223 - -
Vium1026g00006 223 SFLD Glutathione Transferase (cytosolic) 14 203 IPR040079 -
Vium1026g00006 223 Pfam Glutathione S-transferase, N-terminal domain 16 93 IPR004045 -
Vium1026g00006 223 PANTHER MALEYLACETOACETATE ISOMERASE 14 221 - -
Vium1026g00006 223 SFLD Main (cytGST) 14 203 - -
Vium1026g00006 223 CDD GST_C_Zeta 101 218 IPR034330 -
Vium1026g00006 223 NCBIfam maleylacetoacetate isomerase 15 221 IPR005955 GO:0003824|GO:0005737|GO:0009072
Vium1026g00006 223 Gene3D Glutaredoxin 11 96 - -
Vium1026g00006 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 98 223 IPR010987 -
Vium1026g00006 223 Pfam Glutathione S-transferase, C-terminal domain 141 185 - -
Vium1026g00006 223 Gene3D - 97 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1026g00006 Vium-Chr1026 17129 22515 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1026g00006 13 220 Glutathione S-transferase Gene Family AT2G02380 60.096 1.66e-93 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1026g00006 K01800 - gmx:547590 394.43