Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium1026g00002 | ATGACAGAGGGTAGCAATCCAATATCTCCGGTGGACGGCATGGACGTGACCGGCGGCAGCAAAGAGCAGCAGGCGGCGGGAGTGGGGATTCTCCTTCAAATAATGATGTTGGTTCTGTCTTTCGTGTTAGGTCACATCCTTCGTCGCAAGAAGATTTACGTTCTTCCCGAAGCCAGCGCTTCTCTTCTCATTGGCTTGCTCGTTGGTACACTCGCTAACATTTCTCACACTCAAACTAGTATCAGGGCGTGGTTCAACTTTCACGAGGAGTTTTTCTTCCTCTTCCTTTTACCTCCCATAATATTTCAGTCTGGCTTCAGTCTCTCGCCTAAACCTTTTTTCTCTAATTTTGGAGCTATTGTCACGTTTGCTATATTCGGCACCTTTCTGGCTTCCATTGTGACGGGTGTCTTAGTTTATATTGGCGGATTGATGTACCTCATGTACAGATTACCTTTTGTTGAGTGTCTAATGTTTGGTGCACTGATATCCGCAACCGATCCTGTTACTGTTTTGTCCATATTTCAGGAGCTTGGCACAGACGTCAATCTTTATGCCTTGGTTTTTGGAGAATCTGTTTTGAATGATGCAATGGCTATTTCTTTGTACAGGACAATGACAGTGATAAAAAGTCATCCATCTGGACAAAATTTCTTCATGGTGGTTGTTAGATTTTTAGAGACTTTTGTCGGGTCAATGTCTGCTGGTGTTGGAGTTGGTTTTGTATCTGCTCTACTATTTAAATATTCAGGGTTGGATATTGACAATCTTCAGAACTTGGAGAGCTGTCTTTTTGTTCTTTTCCCGTATTTCTCGTACATGCTTGCTGAAGGTCTTGGACTGTCTGGTATTGTATCAATATTGTTCACAGGAATGGTCATGAAGCATTACACATATTCAAATTTGTCACGTAGTTCTCAAAGATTCGTCTCTGCTTTTTTTGAGTTGATATCATCGTTAGCTGAGACATTTGTATTTATCTACATGGGCTTTGATATTGCTATGGAGAAACATAGTTGGTCGCATGTCGGATTTATATTCTTTTCCATTATATTCATTGGAATTGCAAGGTATTATGCTGTAATTTCTATCGTCCCGAGTTATTGA | 1107 | 0.411 | MTEGSNPISPVDGMDVTGGSKEQQAAGVGILLQIMMLVLSFVLGHILRRKKIYVLPEASASLLIGLLVGTLANISHTQTSIRAWFNFHEEFFFLFLLPPIIFQSGFSLSPKPFFSNFGAIVTFAIFGTFLASIVTGVLVYIGGLMYLMYRLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMTVIKSHPSGQNFFMVVVRFLETFVGSMSAGVGVGFVSALLFKYSGLDIDNLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGMVMKHYTYSNLSRSSQRFVSAFFELISSLAETFVFIYMGFDIAMEKHSWSHVGFIFFSIIFIGIARYYAVISIVPSY | 368 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium1026g00002 | 368 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 14 | 363 | IPR018422 | GO:0006812|GO:0015385|GO:0016020|GO:1902600 | |
Vium1026g00002 | 368 | PRINTS | Na+/H+ exchanger signature | 91 | 102 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085 | |
Vium1026g00002 | 368 | PRINTS | Na+/H+ exchanger signature | 105 | 119 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085 | |
Vium1026g00002 | 368 | PRINTS | Na+/H+ exchanger signature | 160 | 170 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085 | |
Vium1026g00002 | 368 | PRINTS | Na+/H+ exchanger signature | 120 | 128 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085 | |
Vium1026g00002 | 368 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Vium1026g00002 | 368 | Gene3D | - | 153 | 205 | - | - | |
Vium1026g00002 | 368 | NCBIfam | sodium/hydrogen exchanger 3 | 35 | 364 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085 | |
Vium1026g00002 | 368 | Pfam | Sodium/hydrogen exchanger family | 36 | 364 | IPR006153 | GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium1026g00002 | Vium-Chr1026 | 1149 | 6030 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium1026g00002 | 20 | 343 | Antiporters | AT3G05030 | 34.639 | 1.88e-44 | 159 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium1026g00002 | K14724 | - | gmx:100810105 | 611.683 |