Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium1026g00001 | ATGACAGAGGGTAGCAATCCAATATCTCCGGTGGACGGCATGGACGTGACCGGCGGCAGCAAAGAGCAGCAGGCGGCGGGAGTGGGGATTCTCCTTCAAATAATGATGTTGGTTCTGTCTTTCGTGTTAGGTCACATCCTTCGTCGCAAGAAGATTTACGTTCTTCCCGAAGCCAGCGCTTCTCTTCTCATTGGCTTGCTCGTTGGTACACTCGCTAACATTTCTCACACTCAAACTAGTATCAGGGCGTGGTTCAACTTTCACGAGGAGTTTTTCTTCCTCTTCCTTTTACCTCCCATAATATTTCAGTCTGGCTTCAGTCTCTCGCCTAAACCTTTTTTCTCTAATTTTGGAGCTATTGTCACGTTTGCTATATTCGGCACCTTTCTGGCTTCCATTGTGACGGGTGTCTTAGTTTATATTGGCGGATTGATGTACCTCATGTACAGATTACCTTTTGTTGAGTGTCTAATGTTTGGTGCACTGATATCCGCAACCGATCCTGTTACTGTTTTGTCCATATTTCAGGAGCTTGGCACAGACGTCAATCTTTATGCCTTGGTTTTTGGAGAATCTGTTTTGAATGATGCAATGGCTATTTCTTTGTACAGGACAATGACAGTGATAAAAAGTCATCCATCTGGACAAAATTTCTTCATGGTGGTTGTTAGATTTTTAGAGACTTTTGTCGGGTCAATGTCTGCTGGTGTTGGAGTTGGTTTTGTATCTGCTCTACTATTTAAATATTCAGGGTTGGATATTGACAATCTTCAGAACTTGGAGAGCTGTCTTTTTGTTCTTTTCCCGTATTTCTCGTACATGCTTGCTGAAGGTCTTGGACTGTCTGGTATTGTATCAATATTGTTCACAGGAATGGTCATGAAGCATTACACATATTCAAATTTGTCACGTAGTTCTCAAAGATTCGTCTCTGCTTTTTTTGAGTTGATATCATCGTTAGCTGAGACATTTGTATTTATCTACATGGGCTTTGATATTGCTATGGAGAAACATAGTTGGTCGCATGTCGGATTTATATTCTTTTCCATTATATTCATTGGAATTGCAAGGGCAGCCAATGTGTTCTCATGTGCTTATTTGGTCAACTTGTTCAGACCTACCCGCCGACAAATTCCGCGAAAACATCAGAAAGCACTTTGGTATAGTGGACTTCGAGGGGCAATGGCTTTTGCCCTTGCTCTGCAATCAATTCATGATCTGCCAGATGGACATGGACAGATCATCTTAACTGCAACTACTGCAATAGTTGTTTTGACGGTAGGCTTTCTCATGCTTGTCATCAAATATTTTAATCTAATCATTAGTCATTACATTAAAAATAAATGCATGTGGAAGCAGAGTAAGGTCCTTTGCTATTTCACTCTTTTGAATCTTATTTTCACGCTTTATTCTGTTTCTGACATTCCATATCTATATTCCTATCTAAAAGGCTATTTGAAAAAAGAAAACTTTATGTAA | 1479 | 0.4023 | MTEGSNPISPVDGMDVTGGSKEQQAAGVGILLQIMMLVLSFVLGHILRRKKIYVLPEASASLLIGLLVGTLANISHTQTSIRAWFNFHEEFFFLFLLPPIIFQSGFSLSPKPFFSNFGAIVTFAIFGTFLASIVTGVLVYIGGLMYLMYRLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMTVIKSHPSGQNFFMVVVRFLETFVGSMSAGVGVGFVSALLFKYSGLDIDNLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGMVMKHYTYSNLSRSSQRFVSAFFELISSLAETFVFIYMGFDIAMEKHSWSHVGFIFFSIIFIGIARAANVFSCAYLVNLFRPTRRQIPRKHQKALWYSGLRGAMAFALALQSIHDLPDGHGQIILTATTAIVVLTVGFLMLVIKYFNLIISHYIKNKCMWKQSKVLCYFTLLNLIFTLYSVSDIPYLYSYLKGYLKKENFM | 492 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium1026g00001 | 492 | NCBIfam | sodium/hydrogen exchanger 3 | 35 | 436 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085 | |
Vium1026g00001 | 492 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Vium1026g00001 | 492 | PRINTS | Na+/H+ exchanger signature | 160 | 170 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085 | |
Vium1026g00001 | 492 | PRINTS | Na+/H+ exchanger signature | 105 | 119 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085 | |
Vium1026g00001 | 492 | PRINTS | Na+/H+ exchanger signature | 120 | 128 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085 | |
Vium1026g00001 | 492 | PRINTS | Na+/H+ exchanger signature | 91 | 102 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085 | |
Vium1026g00001 | 492 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 14 | 435 | IPR018422 | GO:0006812|GO:0015385|GO:0016020|GO:1902600 | |
Vium1026g00001 | 492 | Pfam | Sodium/hydrogen exchanger family | 36 | 428 | IPR006153 | GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600 | |
Vium1026g00001 | 492 | Gene3D | - | 153 | 205 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium1026g00001 | Vium-Chr1026 | 623 | 6030 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium1026g00001 | 20 | 443 | Antiporters | AT3G05030 | 33.184 | 3.04e-52 | 183 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium1026g00001 | K14724 | - | gmx:100810105 | 734.561 |