Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10223g00002 ATGGCGAGTGGGTGGATGAAGTCATTGCAGTGCAAGTCAAGAGCTTACGAAGACGTCTACCATCCAAATTCTAAATACCTCATTCCCAGTTCGAGTTGCAGAAAGAGCGTTCAAAACATCAAAGACGTCGTCGTCGACACCACCAAGCCCAGGCCCAAGTCCAAGCCCAAACCCAGGCCCGAAAAGCCTCTTCAGAAACACCCCAGCTCCAGATACCCTCCATCCGCAGCCAAGCCCGATTTTGAAACCACTATCAACCGCTCCCGGAGCGTCACAGCCACCGCCACGCGCCACGCCGACCCTCGCTTCCCTTCTCTCACCGAACTCACCGAGGGGCATCCTTCGCGGAACGTGGTGGAGATAATCTTTCACACCAGCTGGGGGCCCAAGCCTTTCTCGGGCCGTGTCGAGATGATATTTAAGGTCCACAACGGCCCGAGAACGGTCTCCCGCTTCGAGGAGTATCGGGAGACGGTGAAGGGCCGGGCGGGAACAGGGACTGGACCTGCCCATGACTACGAGGAGAATGCGAGATGCGTTGCGGACGGGAATGAGGTCATGAGGTTTCACTGCTTGGGCCCCACCTCCAGCGGCGCCCCCTACGGCGGAGCCTGCGCGTTGTCCTTCCCCGGCGGTAAGGGCTCGGCTATTTGCACATTCGCCGGCAGCGGCGACGCCCATGAAAGCTCTGGCGGAGGTAGGGGCAGGAGGGCAATGCTTGTGTGTCGGGTCGTAGCGGGTCGGGTCTCCAAGCAAAATGGGTTCATGGAATCGTTGTTGGATGGACGAGTTGGGTTCGACTCAGTCAGTGGGGACAACGGCGAGTTATTAGTGTTTGACTCGCGCGCTGTGTTGCCCTGTTTTCTCATCATTTATAAATTGTAA 885 0.5774 MASGWMKSLQCKSRAYEDVYHPNSKYLIPSSSCRKSVQNIKDVVVDTTKPRPKSKPKPRPEKPLQKHPSSRYPPSAAKPDFETTINRSRSVTATATRHADPRFPSLTELTEGHPSRNVVEIIFHTSWGPKPFSGRVEMIFKVHNGPRTVSRFEEYRETVKGRAGTGTGPAHDYEENARCVADGNEVMRFHCLGPTSSGAPYGGACALSFPGGKGSAICTFAGSGDAHESSGGGRGRRAMLVCRVVAGRVSKQNGFMESLLDGRVGFDSVSGDNGELLVFDSRAVLPCFLIIYKL 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10223g00002 294 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 5 292 - -
Vium10223g00002 294 MobiDBLite consensus disorder prediction 32 85 - -
Vium10223g00002 294 SUPERFAMILY ADP-ribosylation 105 293 - -
Vium10223g00002 294 Gene3D - 104 293 - -
Vium10223g00002 294 MobiDBLite consensus disorder prediction 46 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10223g00002 Vium-Chr10223 17207 18510 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10223g00002 21 294 C2H2 Transcription Factor Family AT2G29660 30.794 8.49e-32 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium10223g00002 - - gmx:100804686 527.709