Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10223g00001 ATGACGGAACTGTACCCATGCTTCCGATTCAACGCACTGATTACCATTCTGAAATATGAAATTCTGTTGTTCGTGGAGATGTGCCTGGATCCAATTTGCATGGAGAAAAACCACCATTGGTCATCGCTTCCAACTTGTGCAAAGTGGACCCGCATGACGCATGTTTCAACTCCCTCTTCTCTTTTTTTCTCCCTTCTACTGTTGTCTTTCGTTTGTGGGTTCCTCCATTTCACTCTTGTTTTTTGTTTACTATTTATTTACTTGATTGTTTTTTTCTCTATCCTGTGGCACTTTCCTGTTCCTTTCTACGTTACTAAACCCTTGGTAAAACTTGAGCGTCACTTTATAGGTGCAGGAATTGAAGCTCGAGGTTTTATTTTTGGTCCTCCCATTGCACTGGCTATAGGAGCAAAGTTCGTTCCTTTGAGGAAACCAAAGAAGTTGCCTGGAAAAGTTATTTCCCAAGAATATATTCTTGAATATGGAAGGGACTGTCTTGAGATGCATGTTGGAGCTGTTGAATCTGGTGAACGTGCTTTAGTGGTTGATGATTTGATTGCAACGGGAGGAACACTCTGTGCAGCTATGGATTTGCTAGAACGTGTGGGAGCAGAAGTAGTGGAGTGTGCATGCGTAATTGAATTACCGGAAATGAAGGGTCGTGAGCGTTTGAACGGGAAGCCATTGTACGTGTTGGTGGAATATAAGGAGAAATGA 717 0.424 MTELYPCFRFNALITILKYEILLFVEMCLDPICMEKNHHWSSLPTCAKWTRMTHVSTPSSLFFSLLLLSFVCGFLHFTLVFCLLFIYLIVFFSILWHFPVPFYVTKPLVKLERHFIGAGIEARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISQEYILEYGRDCLEMHVGAVESGERALVVDDLIATGGTLCAAMDLLERVGAEVVECACVIELPEMKGRERLNGKPLYVLVEYKEK 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10223g00001 238 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 118 234 - -
Vium10223g00001 238 Pfam Phosphoribosyl transferase domain 119 219 IPR000836 -
Vium10223g00001 238 CDD PRTases_typeI 118 234 IPR000836 -
Vium10223g00001 238 SUPERFAMILY PRTase-like 90 230 IPR029057 -
Vium10223g00001 238 FunFam Adenine phosphoribosyltransferase 106 238 - -
Vium10223g00001 238 Gene3D - 88 237 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10223g00001 Vium-Chr10223 3831 7752 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10223g00001 118 234 PRT Gene Family AT1G27450 77.778 8.49e-63 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium10223g00001 K00759 - gmx:100306411 235.343