Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10107g00006 ATGGGTAATAACAGGTTCAGATTGTCTGATATGATGCCAAATGCATGGTTCTATAAGCTCAAAGATATGAGCAAATCAAGGAAGAAAAATGGCCCTCATGTTACGAAGAACAAAGTTACCTCACCAACAACCTCCCAAAGGTCACAACCGAGATACTCTCATTGTTTCTCCATTGAACCGAACATAGCTGGTAAGTTATACAACTCTCCTATTTACACTAAGCACTCAGACAACATATTCATTGATTCACCAAGAAGATCATCTAAAAGAAAAACCAAGAGAAAAACCATTTATAAGCCTTCTCCCACAGTTGTCTCTTCACCAGTCATAGAAAGTTTTAGTTCTCATTCCACAAATTGGATTAAGCCAAATCCACCTCACTCTTCTGACTATTACCTCTCCTCCTCCCAGAGTTCTTATGAATCAAACTTCCATGAATATGTTTCATCTGAGTCTGAGTGTGACAAGTTCACTATTCCTGACCTGCTTAATGGAGTAGCCTCTGAATGCAGTTGTAGAATTAGCTCTTCCACCAATGACATCATCATTGACATGAAAAATGAACCACTCACTGGAAATTCTCAAAATCTTGATGGGTTTGACACAATTTCACAATTAGGCCTTCCTCCAATATTGACAAAGCCAGTGAAGTTTGATGATAAGGTCATTGAAACCATTGAGTTGAGAAGATCAACTAAATTTGATGAGGTAAATTCTCATCAATCTCAAGCTGTTAAAGTTAGCAAAGAGGAAAGCAGTAGAACTAAGAGAGACAGAAAAACCAGTCCAATATCTAGAATTTCCTCTGCTAATTCTACTGGTATAAGACTTAGAGTCAATTCTCCCAAACTTGCAAGCAAGAAAGTTCAAGCCTATTCAAGAAGGAGTGTTTCATCCAAAGCAGGCAAGGCCTCAGTGGATACAGGGTTTCCAGAGGGATTTGCTGTTGTTAAGTCCTCACTTGATCCACAAAGAGACTTCAGGGAATCAATGGTGGAGATGATAGTGGAGAACAATATCCGAGCATCAAAAGATTTGGAGAACTTGCTTGCATGCTATCTTTCACTGAATTCAAGGGAATACCATGATCTCATTGTCAAAGCATTTGAGCAAATTTGGTATGACATGACTCTACTTGGAATGTAA 1146 0.3866 MGNNRFRLSDMMPNAWFYKLKDMSKSRKKNGPHVTKNKVTSPTTSQRSQPRYSHCFSIEPNIAGKLYNSPIYTKHSDNIFIDSPRRSSKRKTKRKTIYKPSPTVVSSPVIESFSSHSTNWIKPNPPHSSDYYLSSSQSSYESNFHEYVSSESECDKFTIPDLLNGVASECSCRISSSTNDIIIDMKNEPLTGNSQNLDGFDTISQLGLPPILTKPVKFDDKVIETIELRRSTKFDEVNSHQSQAVKVSKEESSRTKRDRKTSPISRISSANSTGIRLRVNSPKLASKKVQAYSRRSVSSKAGKASVDTGFPEGFAVVKSSLDPQRDFRESMVEMIVENNIRASKDLENLLACYLSLNSREYHDLIVKAFEQIWYDMTLLGM 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10107g00006 381 Pfam Transcriptional repressor, ovate 320 376 IPR006458 -
Vium10107g00006 381 MobiDBLite consensus disorder prediction 26 53 - -
Vium10107g00006 381 Pfam DNA-binding domain 1 48 IPR025830 GO:0003677
Vium10107g00006 381 MobiDBLite consensus disorder prediction 239 267 - -
Vium10107g00006 381 MobiDBLite consensus disorder prediction 35 53 - -
Vium10107g00006 381 MobiDBLite consensus disorder prediction 247 263 - -
Vium10107g00006 381 NCBIfam uncharacterized plant-specific domain TIGR01568 314 376 IPR006458 -
Vium10107g00006 381 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 116 376 IPR038933 GO:0045892
Vium10107g00006 381 ProSiteProfiles OVATE domain profile. 316 375 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10107g00006 Vium-Chr10107 91046 92573 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vium10107g00006 Ovate 4.1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium10107g00006 - - gmx:100784032 619.002