Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10093g00005 ATGCGAAAGCTCAAACAGAGACCAATCATCCCAACTCACTCGCTGTGCGCCCTTTTTCGCTATTCGAATAAAATGGTAGTATTCCCAGACCCTAACCAGTCGCATAGCACCCCAATTCGCCATACAGATCGTCAAACAGATAGCAACTCTCTCAAACCATTGGCACAGCGCGTCTATTCGCTGTGCAAATGCCCTGGCAGAGAGCACCTCAGCAGGTGGTTCAAAAGAGAAGCACAGAACATCTCCGATGCGCAAAAGTGGTGGCTGACTCACTGCGACATGTCTTCCGTTTTCCTCGCCGGTGATAGTGCAGGCGCCAACATAGCTTATAATGTGGCCACCCGCATGGGATCATCATCATCGTCATCATCAAACACGACGACACCATTATCTCTCAAGGGTGTCGTACTGATCCAACCTTTCTTTGGAGGAGAAGAAAGAACTAGCTCTGAGAAGCATTTCCTTCAGCCACCCAATTCGGCGCTCACTTTATCCGTTTCCGACACTTACTGGCGCTTGGCGCTTCCTCTTGGAGCCACCCGTGACCACCCATATTGCAACCCTCTTGCACATGGCACGGTCAAGTTGAGAGATTTGAGGGTTTCTTCCATTATGGTGTGCGTTTCAGAAATGGATATACTGAAAGATAGGAACTTGGAGTTCTCAAAAGCTTTGGCTAAAGCAGGAAAAAGGGTTGAAACAGTTTTTTTCAAAGGCGTAGGCCATGCCTTCCAAGTGCTGCATAATTACCAGCTTTCACATTCCCGAACCCAAGAAATGATAACCCATATCAGAAACTTCGTTGGAAGCCACGTCATTACGGAGCAGAAAGAGAAAAAGAGGGTAGAAATATCAGAGGAGAGAGAAAAAAAACGAAGCCACGTCATTACGGAGTTAACTCTGTTTAAGCCAATTTAA 918 0.4695 MRKLKQRPIIPTHSLCALFRYSNKMVVFPDPNQSHSTPIRHTDRQTDSNSLKPLAQRVYSLCKCPGREHLSRWFKREAQNISDAQKWWLTHCDMSSVFLAGDSAGANIAYNVATRMGSSSSSSSNTTTPLSLKGVVLIQPFFGGEERTSSEKHFLQPPNSALTLSVSDTYWRLALPLGATRDHPYCNPLAHGTVKLRDLRVSSIMVCVSEMDILKDRNLEFSKALAKAGKRVETVFFKGVGHAFQVLHNYQLSHSRTQEMITHIRNFVGSHVITEQKEKKRVEISEEREKKRSHVITELTLFKPI 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10093g00005 305 Gene3D alpha/beta hydrolase 71 285 IPR029058 -
Vium10093g00005 305 Pfam alpha/beta hydrolase fold 84 245 IPR013094 GO:0016787
Vium10093g00005 305 PANTHER ARYLACETAMIDE DEACETYLASE 80 249 - -
Vium10093g00005 305 SUPERFAMILY alpha/beta-Hydrolases 91 268 IPR029058 -
Vium10093g00005 305 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 97 109 IPR033140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10093g00005 Vium-Chr10093 47255 53693 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10093g00005 73 268 Carbohydrate Esterase AT5G16080 50.000 6.96e-60 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium10093g00005 - - vum:124849212 610.527