Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10081g00003 GTTCACAGGTCTGTACAAATTTTAAGAGACAAGCAAGAGCTGGCTGACACTCAGAAAGAATTGGCCAAGCTTCAACTTGCTCAGAAAGAATCATCTTCCTCCACCCATTCACAGTCCAACGAGGAGAGATCATCACCAACCACAGATCCTAAAAAAACTGACAATGCATCTGATGCAAACAACCAGCAGTTGGCTCTTGCTCTACCTCATCAAATTTCCCCTCAGCAGCAGCCTGCAGCGCCTCCTGCTCAGGCTCAGGCACCTGCATCAAATGTGACTCAAGCCCCTCAGCAACCTCCTTATTACATGCCTCCCACCCCTCTGCAGAATACACCTGTGCCCCAGAACCAGTATTTGCCTTCTGATCAACAATATCGAACTCCCCAACTTGTGGCCCCACAACCAACACCATCTCAAGTAACACCGACCCCACCCGTGCAACAATTTTCTCACTATCAACAGCAACAGCCACAACCTCAACAACAACAGCAGCAACTCCAGCAGCAGCTCCAGCAGCAACAACAGTGGTCACAGCAGGTGCCATCACCTCAGCCACCCTCAATGCAATCTCAAACAAGACCCCCCTCTCCAGCTATGTACCCTCCATACCAGCCGAACCAAGCAACAAACCCATCACCTGCAGAAACACTTCCAAACAGCATGCCCATGCAAGTGCCGTATTCAGGAGTTCCACCGCCAGGATCTAGCCGAGCTGACACAATACCATATGGATATGGAGGAGCTGGAAGAACAGTTCAACAACAGACTCCACCCCAGCAGATGAAGGGTTCTTTTCCTGCACCACCAAGTGAAATGTATGGACCTACTGGTTCTCTCCCGGCCCTTCCTCCTCCTGGTAGTGCATACATGATGTATGAGGGTGAGGGAGGAAGAACACATCATCCACCACAACCTCATTTTACTCAACCTGGATATCCTCCAACAAGTGGTTCCCTTCAGAACCCCCCAAGCCATAATCTTATGGTTCGAAATCCCAACCAGTCGCAGTTTGTCCGCAACCATCCCTACAATGAGTTGATTGAGAAATTGGTGAGCATGGGATTCAGGGGAGACCATGTTGTCAGTGTGATCCAGAGGATGGAGGAGAGTGGACAGGCCATTGATTTCAATTCGGTACTTGACAGGTTGAATGTGCATAGCTCTGTGGGTCCTCAGAGAGGATGGTCAGGGTGA 1194 0.5008 VHRSVQILRDKQELADTQKELAKLQLAQKESSSSTHSQSNEERSSPTTDPKKTDNASDANNQQLALALPHQISPQQQPAAPPAQAQAPASNVTQAPQQPPYYMPPTPLQNTPVPQNQYLPSDQQYRTPQLVAPQPTPSQVTPTPPVQQFSHYQQQQPQPQQQQQQLQQQLQQQQQWSQQVPSPQPPSMQSQTRPPSPAMYPPYQPNQATNPSPAETLPNSMPMQVPYSGVPPPGSSRADTIPYGYGGAGRTVQQQTPPQQMKGSFPAPPSEMYGPTGSLPALPPPGSAYMMYEGEGGRTHHPPQPHFTQPGYPPTSGSLQNPPSHNLMVRNPNQSQFVRNHPYNELIEKLVSMGFRGDHVVSVIQRMEESGQAIDFNSVLDRLNVHSSVGPQRGWSG 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10081g00003 397 MobiDBLite consensus disorder prediction 143 186 - -
Vium10081g00003 397 Coils Coil 7 27 - -
Vium10081g00003 397 MobiDBLite consensus disorder prediction 112 134 - -
Vium10081g00003 397 MobiDBLite consensus disorder prediction 19 236 - -
Vium10081g00003 397 Pfam UBA-like domain (DUF1421) 343 387 IPR010820 -
Vium10081g00003 397 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 397 - -
Vium10081g00003 397 MobiDBLite consensus disorder prediction 209 223 - -
Vium10081g00003 397 MobiDBLite consensus disorder prediction 187 208 - -
Vium10081g00003 397 MobiDBLite consensus disorder prediction 24 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10081g00003 Vium-Chr10081 16250 17686 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10081g00003 342 397 Trihelix Transcription Factor Family AT5G14540 40.000 7.27e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium10081g00003 - - vum:124822732 627.861