Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1007g00003 ATGTCATCCATGGCTTTTCTTTCACATCCTTATTTCTTTGCAGCTTTGACCCTTTTGGTGGTTCAATTTCTGTTCAGAAAACTGAGCAAAAGGGATGGGAAGAGGTATCACCCTGTTGCTGGCACTGTGTTTAATCAGATGATAAACTTCCACAGGTTGCACCATTACATGACTCATCTTGCTGCCAAACACAGAACATACAGATTGCTCAACCTTTTCAGATATGAAGTTTACACTGCAGAACCGAGTAATGTTGAGTACATACTCAAAACCAATTTTGAGAATTATGGAAAGGGCTTGTACAACTATCAAAATTTGAAGGATTTACTAGGTGATGGGATTTTCACTGTTGATGGGGAGAAATGGCGGGAACAAAGGAAAATATCAAGTCATGAATTCTCTACCAAGATGTTAAGGGACTTCAGCGTTTCAGTATTCAGAAAGAATGCAGCAAAACTTGCAGACATAGTGTCTGAATCTGCAACTTCTAATAGTTCGTTGGAAATCCAAGACCTTTTCATGAGATCAACACTGGATTCAATTTTCCAAGTTGCATTTGGAACTGAACTTGACAGCATGTGTGGATCAAGTCAAGAAGGGAAGATTTTTGCTGATGCTTTTGATGCATCAAGTGCACTCACCCTCTATCGTTATGTTGATGTCTTCTGGAAGATCAAGAAATTTCTGAATATTGGATCAGAGGCCAAATTAAGAAAGACTACTAAAGTTTTAGATGAATTTGTTTTGAACCTAATAAAAAATAGAATTCAGCAAATGCAGATTTCAAGGGGAGGTTCCGATAGTAAACGTGAAGATATTTTGTCAAGGTTTCTGCAAGCGAAGGGATATGATTCAACATACCTAAGAGATATAATTCTAAACTTTGTTATTGCTGGGAAAGACACAACAGCAGCCACACTTTCTTGGTTCATGTACATGTTATGTAAGTACCCTGCAGTTCAAGAAAAAGCAGCAGAAGAAGTGAAAGAAGCAACAAATACAAAAACAATTAGCAGCTATACTGAATTTGCGTCAAGTGTAACAGATGAAGCTCTTGAAAAGATGGACTATCTTCATGCAGCAATTACAGAAACTCTCAGACTTTATCCTGCTGTCCCTGTGGATGCAAAGATTTGTTTTTCTGATGACACATTACCAGATGGGTACAGTGTTAATAAGGGAGATATGGTATCTTACCAACCTTATGCAATGGGTCGGATGAAATTTATATGGGGTGATGATGCAGAGGATTTCAGGCCAGAAAGATGGCTTGATGAGAATGGCATTTTTAAGCAAGAGAGCCCTTTCAAGTTTACAGCTTTTCAGGCTGGTCCTCGGATTTGTCTAGGAAAAGAGTTTGCTTATAGACAGATGAAGATATTTTCAGCAGTTTTATTAGGTTGTTTCCGCTTCAGATTGAATGATGAGAAGAGAAATGTGACCTACAAGACGATGATAAATCTTCATATTGATGGAGGCCTTGAAATCAAGGCCTTGCACAGATAA 1506 0.3825 MSSMAFLSHPYFFAALTLLVVQFLFRKLSKRDGKRYHPVAGTVFNQMINFHRLHHYMTHLAAKHRTYRLLNLFRYEVYTAEPSNVEYILKTNFENYGKGLYNYQNLKDLLGDGIFTVDGEKWREQRKISSHEFSTKMLRDFSVSVFRKNAAKLADIVSESATSNSSLEIQDLFMRSTLDSIFQVAFGTELDSMCGSSQEGKIFADAFDASSALTLYRYVDVFWKIKKFLNIGSEAKLRKTTKVLDEFVLNLIKNRIQQMQISRGGSDSKREDILSRFLQAKGYDSTYLRDIILNFVIAGKDTTAATLSWFMYMLCKYPAVQEKAAEEVKEATNTKTISSYTEFASSVTDEALEKMDYLHAAITETLRLYPAVPVDAKICFSDDTLPDGYSVNKGDMVSYQPYAMGRMKFIWGDDAEDFRPERWLDENGIFKQESPFKFTAFQAGPRICLGKEFAYRQMKIFSAVLLGCFRFRLNDEKRNVTYKTMINLHIDGGLEIKALHR 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1007g00003 501 Gene3D Cytochrome P450 22 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1007g00003 501 Pfam Cytochrome P450 37 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1007g00003 501 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1007g00003 501 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1007g00003 501 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1007g00003 501 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1007g00003 501 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1007g00003 501 CDD CYP86A 65 494 - -
Vium1007g00003 501 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1007g00003 501 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1007g00003 501 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1007g00003 501 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1007g00003 501 SUPERFAMILY Cytochrome P450 34 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1007g00003 501 PANTHER CYTOCHROME P450 24 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1007g00003 Vium-Chr1007 68334 72581 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1007g00003 31 501 Cytochrome P450 AT2G45510 54.088 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1007g00003 - - gmx:100789049 888.256