Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10069g00001 ATGGACTCTCTCTCTGCCACCAAACACCACAACAATCTCCCCAAGCCTTCCTCCCTCCACATGGAGGCTCCGCCGCCGGAGCCCAGTCCTCTCCGGAAGATCATGGTTGTCGCATCCATTGCCGCAGGGGTGCAGTTCGGCTGGGCCCTTCAGCTCTCCCTCCTCACCCCATACGTCCAGCTCTTGGGAATTCCCCACACTTGGGCCTCATTCATCTGGCTCTGCGGCCCAATCTCCGGCATGCTGGTCCAGCCCATCGTCGGCTACCACAGCGACCGCTGCACTTCCCGCTTCGGCCGCCGTCGCCCCTTCATCGCCGCCGGAGCTCTGGCCGTTGCCATCGCCGTCTTTCTCATAGGCTACGCTGCCGACCTCGGCCACATTTTCGGCGACTCCCTCGCCAAGAAAACCCGCCCACGCGCCATCGCCATCTTCGTCGTTGGCTTCTGGATCCTGGACGTGGCCAATAACATGCTCCAGGGCCCCTGCCGTGCCCTCCTCGCCGACCTCTCCGCCGGCGACCACCGCAAGACGCGCAACGCAAACGCCTTCTTCTCCTTCTTCATGGCCGTGGGCAACGTCCTGGGGTACGCCGCGGGGTCCTACAGCGGCCTCCACCACGTCTTCCCCTTCACCAAAACTAAAGCCTGCGACGTCTACTGCGCCAATCTGAAAAGCTGCTTCTTCCTATCCATAGCGCTCCTCCTCAGTCTGGCCACCATCGCCCTCATTTACGTGAAGGAGAACACGGTGCCGTCGGAAAAAAGCACTGCGAGCGTTGCGGAAGAAGATGGGTCCCACGGGGGCATGCCCTGTTTTGGGCAGTTATTCGGTGCGTTTCGGGAACTGAAGCGTCCCATGTGGATCCTTCTCTTGGTGACGTGTCTCAACTGGATTGCGTGGTTCCCCTTCCTTCTCTTCGACACCGACTGGATGGGCCATGAGGTCTACGGTGGAACCGTCGGAGAAGGAAAGGCCTACGATAGAGGCGTGCGCGCCGGTGCGTTAGGTCTCATGTTGAACTCTCTGGTCCTCGGAGCCACTTCCTTGGGCGTCGATGTCCTCGCGCGTGGAGTCGGGGGCGTCAAGAGGCTCTGGGGAATTGTCAACTTCCTTCTCGCTGTCTGTTTGGCCATGACCGTTTTGGTCACCAAGATGGCCCAGCATTCTCGCCAGTACACTGACCTCCCCGGCGGCATCCACGAGCCCCTCCCTCCTCCCTCCGGCGTCAAAGCCGGCGCGTTGGCCCTCTTTTCCGTCCTCGGAATCCCTCTCGCGATTACTTACAGCATACCCTTTGCTCTGGCGTCAATATTCTCCACCACCTCAGGGGCAGGACAAGGGTTATCTCTCGGAGTCCTCAATCTTGCAATCGTCATACCACAGATGGTGGTGTCTGTGATCAGTGGACCATGGGATGATCTATTTGGCGGCGGTAACTTGCCGGCGTTCGTGGTGGGTGCGGTGGCGGCTGCGGCCAGTGGCATTCTATCCCTGATCCTGCTGCCATCTCCACCGCCGGATTTGGCGAAAACTGCAACCGCAGCAGGGGGAGGGTTCCATTAA 1566 0.6041 MDSLSATKHHNNLPKPSSLHMEAPPPEPSPLRKIMVVASIAAGVQFGWALQLSLLTPYVQLLGIPHTWASFIWLCGPISGMLVQPIVGYHSDRCTSRFGRRRPFIAAGALAVAIAVFLIGYAADLGHIFGDSLAKKTRPRAIAIFVVGFWILDVANNMLQGPCRALLADLSAGDHRKTRNANAFFSFFMAVGNVLGYAAGSYSGLHHVFPFTKTKACDVYCANLKSCFFLSIALLLSLATIALIYVKENTVPSEKSTASVAEEDGSHGGMPCFGQLFGAFRELKRPMWILLLVTCLNWIAWFPFLLFDTDWMGHEVYGGTVGEGKAYDRGVRAGALGLMLNSLVLGATSLGVDVLARGVGGVKRLWGIVNFLLAVCLAMTVLVTKMAQHSRQYTDLPGGIHEPLPPPSGVKAGALALFSVLGIPLAITYSIPFALASIFSTTSGAGQGLSLGVLNLAIVIPQMVVSVISGPWDDLFGGGNLPAFVVGAVAAAASGILSLILLPSPPPDLAKTATAAGGGFH 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10069g00001 521 MobiDBLite consensus disorder prediction 1 26 - -
Vium10069g00001 521 Pfam MFS/sugar transport protein 42 300 - -
Vium10069g00001 521 NCBIfam sucrose/proton symporter 30 507 IPR005989 GO:0005886|GO:0008515|GO:0015770
Vium10069g00001 521 CDD MFS_SLC45_SUC 34 481 - -
Vium10069g00001 521 Gene3D MFS general substrate transporter like domains 28 515 IPR036259 -
Vium10069g00001 521 PANTHER SUGAR TRANSPORTER 31 501 - -
Vium10069g00001 521 FunFam Sucrose transport protein 28 502 - -
Vium10069g00001 521 SUPERFAMILY MFS general substrate transporter 32 506 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10069g00001 Vium-Chr10069 4522 7184 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10069g00001 27 521 Sucrose Transporter Gene Family AT1G22710 70.120 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium10069g00001 K15378 - gmx:547679 921.768