Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10018g00001 ATGTCAAAAAAACTTTCGTACAATCCTTCCTTTAGGGTTCCTTTACTTCTCAATGATGAGGAGAAAGCCATTGCCTCTTCTGCCAAAAATACTGTATCCTTCTTTCGTACATGCCTTAATGGACTCAATACAATAGCAGGTGTTGGCATACTCTCGGTTCCTTATGCTCTTGCAACAGGAGGCTGGTTAAGCTTGGTTCTTCTGTTTTCTATTGCCGCTGCTGCATTTTACACGGGCCTTCTGATTAAAAGATGCATGGATAAGGACTCAAACATCAGAACCTACCCTGATATAGGTGAACTCGCATTTGGAAAGACAGGAAGACTGATAGTGTCAATATCCATGTACACTGAACTATATCTGGTTTCAATAGGATTCTTGATTCTAGAAGGTGATAACTTGAGTAACATATTCCCCATTGGAGAGGTTCACTTAGCAGGCTTAGCAATTGGTGGGAAGCAATTATTTGTGATTATGGTTGCCCTTTTCATTTTGCCCACGGTTTGGTTGGACAACTTGAGTCTACTCTCTTATGTATCTGCAAGTGGAGTCTTTGCTTCTGTTCTCATCATCCTTTCAATAACATGGACTGCAACATTTGATGGAGTTGGTTTTCATCATAAAGGAACTCTTGTCCGTTGGAATGGTCTCCCCACAGCTGTTAGCTTGTATGCCTTCTGTTATTGCGCTCATCCTGTCTTTCCCACACTGTACAATTCGATGACAAACAAACATCAGTTCTCTAAC 747 0.4123 MSKKLSYNPSFRVPLLLNDEEKAIASSAKNTVSFFRTCLNGLNTIAGVGILSVPYALATGGWLSLVLLFSIAAAAFYTGLLIKRCMDKDSNIRTYPDIGELAFGKTGRLIVSISMYTELYLVSIGFLILEGDNLSNIFPIGEVHLAGLAIGGKQLFVIMVALFILPTVWLDNLSLLSYVSASGVFASVLIILSITWTATFDGVGFHHKGTLVRWNGLPTAVSLYAFCYCAHPVFPTLYNSMTNKHQFSN 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10018g00001 249 PANTHER AMINO ACID TRANSPORTER 27 247 - -
Vium10018g00001 249 Pfam Transmembrane amino acid transporter protein 31 248 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10018g00001 Vium-Chr10018 2095 3069 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10018g00001 17 249 Amino Acid or Auxin Permease AAAP Family AT3G28960 59.227 2.29e-98 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium10018g00001 K15015 - gmx:100794374 422.935