Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01855 ATGGCAATTTTGGGTATCCAACTCAATGCAGTGTCTGTTGTAAACCCTATTATGGTAATATGGATTGCTGTGGAATTTTGTGTGCATATAGTCCATGCCTTCACGAGTATGGGCAGTAATGAGATGGATAAAGCTCCAAAAGAGAAGGAGTCAAAGACGCCACCACCTATGTCACAGGAGCAGTCTTCAACCACCGCTACTGGAACAATTAATCCTGATTGGCCTGGATTTCAGGCATATTCTCCTATACCTCCACACAGTTTCTTGGCATCAAGTCCACAAGCTCACCCTTATATGTGGGGTCCGGGGTCCAGGTAA 318 0.4528 MAILGIQLNAVSVVNPIMVIWIAVEFCVHIVHAFTSMGSNEMDKAPKEKESKTPPPMSQEQSSTTATGTINPDWPGFQAYSPIPPHSFLASSPQAHPYMWGPGSR 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01855 105 MobiDBLite consensus disorder prediction 39 105 - -
Vimu9g01855 105 PANTHER NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1 1 38 - -
Vimu9g01855 105 Pfam G-box binding protein MFMR 37 102 IPR012900 -
Vimu9g01855 105 MobiDBLite consensus disorder prediction 55 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01855 Vimu-Chr9 28754524 28755088 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01855 37 101 bZIP Transcription Factor Family AT1G32150 56.579 2.65e-20 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01855 K09060 - gmx:100101882 127.872