Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01851 ATGGCAATTTTGGGTATCCAACTCAATGCAGTGTCTGTTGTAAACCCTATTATGGTAATATGGATTGCTGTGGAATTTTGTGTGCATATAGTCCATGCTTTCACGAGTATGGGCAGTAGTGAGATGGATAAAGCTCCAAAAGAGAAGGAGTCAAAGACGCCACCACCTATGTCACAGGAGCAGTCTTCAACCACCGCTACTGGAACAATTAATTCTGATTGGCCTGGATTTCAGGCATATTCTCCTATACCTCCACACAGTTTCTTGGCATCAAGTCCACAAGCTCACCCTTATATGTGGGGTCCAGGAAATACTTATGTGCGGTTTGTTTGA 333 0.4354 MAILGIQLNAVSVVNPIMVIWIAVEFCVHIVHAFTSMGSSEMDKAPKEKESKTPPPMSQEQSSTTATGTINSDWPGFQAYSPIPPHSFLASSPQAHPYMWGPGNTYVRFV 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01851 110 MobiDBLite consensus disorder prediction 39 78 - -
Vimu9g01851 110 Pfam G-box binding protein MFMR 37 103 IPR012900 -
Vimu9g01851 110 MobiDBLite consensus disorder prediction 55 76 - -
Vimu9g01851 110 PANTHER NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01851 Vimu-Chr9 28147400 28148145 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01851 37 101 bZIP Transcription Factor Family AT1G32150 57.895 4.73e-21 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01851 K09060 - gmx:100101882 125.946